D. rerio Gene: srp9 - ENSDARG00000042851 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000042851
Namesrp9
Descriptionsignal recognition particle 9 [Source:ZFIN;Acc:ZDB-GENE-040426-1106]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:56668

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
629
  • 629
97.90
  • 97.90
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
1.20e3
  • 1.20e3
  • 1.23e3
  • 1.65e3
  • 1.85e3
  • 2.03e3
  • 4.44e3
95.98
  • 95.98
  • 95.89
  • 94.49
  • 93.80
  • 93.21
  • 85.14
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.44e3
  • 1.44e3
95.18
  • 95.18
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.46e3
  • 1.46e3
95.10
  • 95.10
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.60e3
  • 1.60e3
94.63
  • 94.63
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
1.74e3
  • 1.74e3
  • 1.82e3
  • 2.31e3
  • 2.40e3
  • 2.48e3
  • 2.56e3
  • 2.83e3
  • 2.86e3
  • 3.81e3
  • 5.77e3
94.19
  • 94.19
  • 93.90
  • 92.26
  • 91.98
  • 91.68
  • 91.43
  • 90.54
  • 90.44
  • 87.24
  • 80.68
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.84e3
  • 1.84e3
  • 2.95e3
93.83
  • 93.83
  • 90.12
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.94e3
  • 1.94e3
93.52
  • 93.52
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.07e3
  • 2.07e3
93.08
  • 93.08
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.09e3
  • 2.09e3
93.00
  • 93.00
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.10e3
  • 2.10e3
92.97
  • 92.97
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
2.40e3
  • 2.40e3
  • 4.48e3
  • 5.46e3
  • 9.11e3
  • 9.89e3
91.98
  • 91.98
  • 85.01
  • 81.72
  • 69.49
  • 66.89
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.51e3
  • 2.51e3
91.61
  • 91.61
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
2.53e3
  • 2.53e3
91.53
  • 91.53
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
2.58e3
  • 2.58e3
91.37
  • 91.37
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.61e3
  • 2.61e3
91.27
  • 91.27
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
2.74e3
  • 2.74e3
90.84
  • 90.84
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
2.78e3
  • 2.78e3
  • 3.30e3
90.68
  • 90.68
  • 88.96
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.81e3
  • 2.81e3
90.60
  • 90.60
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
2.85e3
  • 2.85e3
  • 3.80e3
90.46
  • 90.46
  • 87.27
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
3.13e3
  • 3.13e3
89.51
  • 89.51
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000106zygote stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
3.23e3
  • 3.23e3
  • 3.37e3
  • 3.47e3
  • 3.62e3
  • 3.89e3
  • 3.94e3
  • 5.56e3
  • 5.99e3
  • 6.39e3
  • 6.57e3
  • 6.77e3
  • 6.81e3
  • 7.50e3
  • 1.08e4
89.18
  • 89.18
  • 88.71
  • 88.38
  • 87.87
  • 86.98
  • 86.82
  • 81.39
  • 79.95
  • 78.60
  • 78.01
  • 77.32
  • 77.20
  • 74.90
  • 63.88
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
3.38e3
  • 3.38e3
88.69
  • 88.69
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
3.45e3
  • 3.45e3
88.43
  • 88.43
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
3.50e3
  • 3.50e3
88.27
  • 88.27
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
3.59e3
  • 3.59e3
87.97
  • 87.97
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
3.62e3
  • 3.62e3
  • 4.79e3
87.89
  • 87.89
  • 83.96
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
3.99e3
  • 3.99e3
86.63
  • 86.63
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
4.13e3
  • 4.13e3
86.17
  • 86.17
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
4.61e3
  • 4.61e3
  • 5.37e3
  • 6.19e3
84.57
  • 84.57
  • 82.03
  • 79.26
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
5.06e3
  • 5.06e3
  • 5.32e3
  • 5.42e3
  • 8.85e3
83.05
  • 83.05
  • 82.19
  • 81.84
  • 70.38
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
5.53e3
  • 5.53e3
81.48
  • 81.48
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • UBERON:0000106zygote stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000015Blastula:Dome
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000026Segmentation:14-19 somites
6.40e3
  • 6.40e3
  • 6.40e3
  • 6.40e3
  • 6.64e3
  • 6.89e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.97e3
  • 8.53e3
  • 8.54e3
  • 8.71e3
  • 8.79e3
  • 8.79e3
  • 8.96e3
  • 8.96e3
  • 9.13e3
  • 9.13e3
  • 9.13e3
  • 9.71e3
  • 9.96e3
  • 9.96e3
78.57
  • 78.57
  • 78.57
  • 78.57
  • 77.77
  • 76.92
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 73.32
  • 71.43
  • 71.41
  • 70.82
  • 70.57
  • 70.57
  • 69.99
  • 69.98
  • 69.43
  • 69.43
  • 69.43
  • 67.48
  • 66.66
  • 66.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
7.84e3
  • 7.84e3
73.75
  • 73.75
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

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