D. rerio Gene: ltk - ENSDARG00000042861 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000042861
Nameltk
Descriptionleukocyte receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-030616-115]
OrganismDanio rerio (zebrafish)
Synonym(s)alk, shd(l), si:dz107o16.1, tyk1
Orthologs(s)3 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
4.65e3
  • 4.65e3
84.44
  • 84.44
AEIR
  • AEIR
CL:0000431iridophore
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000035Larval:Protruding-mouth
7.47e3
  • 7.47e3
  • 1.49e4
  • 1.49e4
75.00
  • 75.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
8.83e3
  • 8.83e3
70.43
  • 70.43
AEIR
  • AEIR
UBERON:0003083trunk neural crest
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000028Segmentation:26+ somites
9.96e3
  • 9.96e3
  • 1.49e4
66.67
  • 66.67
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.11e4
  • 1.11e4
  • 1.33e4
62.79
  • 62.79
  • 55.43
AEIR
  • AEIR
  • AEIR
UBERON:0010312immature eye
  • ZFS:0000029Pharyngula:Prim-5
1.21e4
  • 1.21e4
59.50
  • 59.50
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.24e4
  • 1.24e4
58.34
  • 58.34
AEIR
  • AEIR
UBERON:0002328notochord
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
1.32e4
  • 1.32e4
  • 1.34e4
55.97
  • 55.97
  • 54.97
AEIR
  • AEIR
  • AEIR
CL:0000147pigment cell
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
1.33e4
  • 1.33e4
  • 1.49e4
55.55
  • 55.55
  • 49.99
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.41e4
  • 1.41e4
52.72
  • 52.72
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.47e4
  • 1.47e4
50.90
  • 50.90
AEIR
  • AEIR
CL:0005001iridoblast
  • ZFS:0000030Pharyngula:Prim-15
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
1.56e4
  • 1.56e4
47.89
  • 47.89
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
1.58e4
  • 1.58e4
47.12
  • 47.12
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.61e4
  • 1.61e4
  • 2.02e4
45.97
  • 45.97
  • 32.30
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
1.67e4
  • 1.67e4
  • 1.73e4
  • 1.74e4
  • 2.01e4
  • 2.10e4
44.10
  • 44.10
  • 42.06
  • 41.80
  • 32.74
  • 29.85
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.73e4
  • 1.73e4
41.98
  • 41.98
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.74e4
  • 1.74e4
  • 1.86e4
41.80
  • 41.80
  • 37.70
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.82e4
  • 1.82e4
38.95
  • 38.95
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.85e4
  • 1.85e4
38.21
  • 38.21
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.87e4
  • 1.87e4
37.46
  • 37.46
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.03e4
  • 2.03e4
31.98
  • 31.98
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.16e4
  • 2.16e4
27.81
  • 27.81
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Orthologs

Orthology information comes from OMA : ENSDARG00000042861.

Cross-references

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