D. rerio Gene: nthl1 - ENSDARG00000042881 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000042881
Namenthl1
Descriptionnth-like DNA glycosylase 1 [Source:ZFIN;Acc:ZDB-GENE-120511-4]
OrganismDanio rerio (zebrafish)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
4.07e3
  • 4.07e3
86.38
  • 86.38
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
6.12e3
  • 6.12e3
79.51
  • 79.51
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
7.48e3
  • 7.48e3
  • 9.69e3
74.97
  • 74.97
  • 67.57
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
8.05e3
  • 8.05e3
73.05
  • 73.05
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
8.85e3
  • 8.85e3
  • 1.12e4
70.37
  • 70.37
  • 62.34
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
8.87e3
  • 8.87e3
70.31
  • 70.31
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
9.32e3
  • 9.32e3
  • 1.05e4
68.80
  • 68.80
  • 64.99
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
9.37e3
  • 9.37e3
  • 1.03e4
  • 1.06e4
  • 1.20e4
  • 1.21e4
68.63
  • 68.63
  • 65.44
  • 64.52
  • 59.89
  • 59.47
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
9.40e3
  • 9.40e3
68.52
  • 68.52
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
9.63e3
  • 9.63e3
67.76
  • 67.76
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.86
  • 64.86
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
63.93
  • 63.93
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
  • 1.70e4
63.82
  • 63.82
  • 43.01
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
1.09e4
  • 1.09e4
  • 1.39e4
63.36
  • 63.36
  • 53.62
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
62.92
  • 62.92
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.17
  • 62.17
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.14e4
  • 1.14e4
61.82
  • 61.82
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.14e4
  • 1.14e4
61.74
  • 61.74
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
57.87
  • 57.87
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.29e4
  • 1.29e4
56.85
  • 56.85
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.30e4
  • 1.30e4
56.34
  • 56.34
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.32e4
  • 1.32e4
55.64
  • 55.64
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.33e4
  • 1.33e4
55.55
  • 55.55
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.39e4
  • 1.39e4
53.59
  • 53.59
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSDARG00000042881 (nthl1)
Uniprot/SPTREMBLF1QBP9, F1QBP9_DANRE
ZFINZDB-GENE-120511-4 (nthl1)

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