D. rerio Gene: TNPO2 (1 to many) - ENSDARG00000042887 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000042887
NameTNPO2 (1 to many)
Descriptiontransportin 2 [Source:HGNC Symbol;Acc:HGNC:19998]
OrganismDanio rerio (zebrafish)
Synonym(s)flj12155, ipo3, kpnb2b, trn2

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
1.36e3
  • 1.36e3
  • 3.25e3
95.45
  • 95.45
  • 89.11
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
1.51e3
  • 1.51e3
  • 2.26e3
94.95
  • 94.95
  • 92.43
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.21e3
  • 2.21e3
92.59
  • 92.59
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
2.67e3
  • 2.67e3
  • 3.60e3
  • 3.95e3
  • 5.57e3
  • 7.87e3
91.06
  • 91.06
  • 87.96
  • 86.78
  • 81.36
  • 73.64
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
3.95e3
  • 3.95e3
86.77
  • 86.77
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
4.06e3
  • 4.06e3
86.41
  • 86.41
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
4.21e3
  • 4.21e3
85.90
  • 85.90
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
4.24e3
  • 4.24e3
85.80
  • 85.80
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
4.43e3
  • 4.43e3
85.17
  • 85.17
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
4.53e3
  • 4.53e3
84.83
  • 84.83
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
4.71e3
  • 4.71e3
84.22
  • 84.22
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
4.98e3
  • 4.98e3
83.34
  • 83.34
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
5.01e3
  • 5.01e3
  • 7.52e3
83.22
  • 83.22
  • 74.83
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.13e3
  • 5.13e3
82.82
  • 82.82
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
5.28e3
  • 5.28e3
82.34
  • 82.34
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
5.31e3
  • 5.31e3
82.24
  • 82.24
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
5.62e3
  • 5.62e3
81.17
  • 81.17
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
5.69e3
  • 5.69e3
80.96
  • 80.96
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
5.86e3
  • 5.86e3
80.39
  • 80.39
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
5.90e3
  • 5.90e3
  • 8.43e3
80.25
  • 80.25
  • 71.77
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
6.22e3
  • 6.22e3
79.17
  • 79.17
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
6.48e3
  • 6.48e3
78.31
  • 78.31
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
6.93e3
  • 6.93e3
76.80
  • 76.80
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.38e4
  • 1.38e4
53.76
  • 53.76
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.72e4
  • 1.72e4
42.41
  • 42.41
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLCABZ01067152, CABZ01067153
EnsemblENSDARG00000042887 (TNPO2 (1 to many))
HGNCHGNC:19998 (TNPO2 (1 to many))
Uniprot/SPTREMBLE7F948, E7F948_DANRE

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