D. rerio Gene: gtpbp1l - ENSDARG00000042900 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000042900
Namegtpbp1l
DescriptionGTP binding protein 1, like [Source:ZFIN;Acc:ZDB-GENE-041007-2]
OrganismDanio rerio (zebrafish)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
2.51e3
  • 2.51e3
  • 2.87e3
  • 4.01e3
  • 6.10e3
  • 6.86e3
91.59
  • 91.59
  • 90.41
  • 86.56
  • 79.57
  • 77.04
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
3.66e3
  • 3.66e3
87.76
  • 87.76
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
3.86e3
  • 3.86e3
87.08
  • 87.08
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
4.24e3
  • 4.24e3
85.81
  • 85.81
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
4.34e3
  • 4.34e3
85.48
  • 85.48
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
4.56e3
  • 4.56e3
84.74
  • 84.74
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
4.97e3
  • 4.97e3
  • 7.39e3
  • 1.07e4
  • 1.29e4
83.35
  • 83.35
  • 75.25
  • 64.21
  • 56.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
5.11e3
  • 5.11e3
82.91
  • 82.91
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
5.76e3
  • 5.76e3
80.71
  • 80.71
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
5.98e3
  • 5.98e3
80.00
  • 80.00
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
6.24e3
  • 6.24e3
79.10
  • 79.10
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
6.61e3
  • 6.61e3
77.87
  • 77.87
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000106zygote stage
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0000066fully formed stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000104life cycle
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
7.43e3
  • 7.43e3
  • 7.47e3
  • 1.13e4
  • 1.14e4
  • 1.18e4
  • 1.20e4
  • 1.23e4
  • 1.29e4
  • 1.36e4
  • 1.36e4
  • 1.36e4
  • 1.38e4
  • 1.39e4
  • 1.50e4
  • 1.50e4
  • 1.53e4
75.13
  • 75.13
  • 75.00
  • 62.06
  • 61.78
  • 60.45
  • 59.80
  • 58.70
  • 56.83
  • 54.61
  • 54.49
  • 54.48
  • 53.78
  • 53.60
  • 49.92
  • 49.73
  • 48.69
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
7.98e3
  • 7.98e3
73.29
  • 73.29
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
8.09e3
  • 8.09e3
72.90
  • 72.90
AEIR
  • AEIR
UBERON:2000058polster
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
8.30e3
  • 8.30e3
  • 8.30e3
  • 8.96e3
72.21
  • 72.21
  • 72.21
  • 69.98
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
8.54e3
  • 8.54e3
  • 1.01e4
71.41
  • 71.41
  • 66.19
AEIR
  • AEIR
  • AEIR
UBERON:0002328notochord
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
8.96e3
  • 8.96e3
  • 9.51e3
  • 9.51e3
  • 1.08e4
69.98
  • 69.98
  • 68.16
  • 68.16
  • 63.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
9.09e3
  • 9.09e3
69.56
  • 69.56
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
9.28e3
  • 9.28e3
  • 1.50e4
68.92
  • 68.92
  • 49.92
AEIR
  • AEIR
  • AEIR
UBERON:0002538hatching gland
  • ZFS:0000026Segmentation:14-19 somites
9.96e3
  • 9.96e3
66.65
  • 66.65
AEIR
  • AEIR
UBERON:0000965lens of camera-type eye
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
1.07e4
  • 1.07e4
  • 1.10e4
  • 1.18e4
  • 1.20e4
64.27
  • 64.27
  • 63.32
  • 60.50
  • 59.98
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.18
  • 64.18
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
1.08e4
  • 1.08e4
  • 1.11e4
  • 1.11e4
  • 1.14e4
  • 1.22e4
  • 1.27e4
  • 1.39e4
  • 1.47e4
  • 1.51e4
  • 1.52e4
64.00
  • 64.00
  • 63.00
  • 62.89
  • 61.90
  • 59.09
  • 57.37
  • 53.30
  • 50.66
  • 49.49
  • 49.04
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
  • 1.13e4
63.81
  • 63.81
  • 62.09
AEIR
  • AEIR
  • AEIR
UBERON:0003051ear vesicle
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000028Segmentation:26+ somites
1.12e4
  • 1.12e4
  • 1.15e4
  • 1.17e4
  • 1.18e4
  • 1.20e4
  • 1.25e4
  • 1.28e4
62.48
  • 62.48
  • 61.34
  • 60.84
  • 60.50
  • 59.98
  • 58.29
  • 57.12
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.12e4
  • 1.12e4
62.34
  • 62.34
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.23
  • 62.23
AEIR
  • AEIR
UBERON:0005426lens vesicle
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000028Segmentation:26+ somites
1.14e4
  • 1.14e4
  • 1.20e4
  • 1.21e4
61.75
  • 61.75
  • 59.98
  • 59.36
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003082myotome
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
1.20e4
  • 1.20e4
  • 1.25e4
  • 1.25e4
59.98
  • 59.98
  • 58.31
  • 58.31
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2001357alar plate midbrain
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
1.20e4
  • 1.20e4
  • 1.26e4
  • 1.26e4
59.98
  • 59.98
  • 57.87
  • 57.87
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001945superior colliculus
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
1.21e4
  • 1.21e4
  • 1.26e4
  • 1.26e4
59.50
  • 59.50
  • 57.87
  • 57.87
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.24e4
  • 1.24e4
58.58
  • 58.58
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.26e4
  • 1.26e4
57.94
  • 57.94
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
57.83
  • 57.83
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.27e4
  • 1.27e4
57.58
  • 57.58
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
1.29e4
  • 1.29e4
  • 1.31e4
  • 1.49e4
56.87
  • 56.87
  • 56.21
  • 50.09
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
55.15
  • 55.15
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
1.49e4
  • 1.49e4
  • 1.54e4
  • 1.58e4
49.94
  • 49.94
  • 48.44
  • 47.25
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.66e4
  • 1.66e4
  • 1.69e4
44.52
  • 44.52
  • 43.34
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBX649639
EnsemblENSDARG00000042900 (gtpbp1l)
Uniprot/SPTREMBLA3KQI1, A3KQI1_DANRE
ZFINZDB-GENE-041007-2 (gtpbp1l)

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