D. rerio Gene: hsh2d - ENSDARG00000042908 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000042908
Namehsh2d
Descriptionhematopoietic SH2 domain containing [Source:ZFIN;Acc:ZDB-GENE-050410-3]
OrganismDanio rerio (zebrafish)
Synonym(s)wu:fk78a10, zgc:113273

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
5.85e3
  • 5.85e3
  • 1.10e4
80.41
  • 80.41
  • 63.02
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
6.52e3
  • 6.52e3
78.18
  • 78.18
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
7.57e3
  • 7.57e3
74.66
  • 74.66
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000025Segmentation:10-13 somites
  • UBERON:0004707pharyngula stage
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
  • UBERON:0000106zygote stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000029Pharyngula:Prim-5
1.03e4
  • 1.03e4
  • 1.22e4
  • 1.22e4
  • 1.24e4
  • 1.27e4
  • 1.39e4
  • 1.49e4
  • 1.50e4
  • 1.54e4
  • 1.58e4
  • 1.61e4
  • 1.61e4
  • 1.67e4
65.61
  • 65.61
  • 59.08
  • 59.08
  • 58.32
  • 57.53
  • 53.59
  • 50.25
  • 49.80
  • 48.37
  • 47.07
  • 46.21
  • 45.94
  • 44.22
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
63.39
  • 63.39
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
62.54
  • 62.54
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
60.60
  • 60.60
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.05
  • 59.05
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
58.86
  • 58.86
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
57.26
  • 57.26
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.35e4
  • 1.35e4
54.79
  • 54.79
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.35e4
  • 1.35e4
54.72
  • 54.72
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.41e4
  • 1.41e4
52.76
  • 52.76
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.51e4
  • 1.51e4
  • 1.61e4
  • 1.84e4
49.38
  • 49.38
  • 46.09
  • 38.38
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
1.57e4
  • 1.57e4
  • 1.79e4
  • 2.00e4
  • 2.03e4
  • 2.06e4
47.50
  • 47.50
  • 39.90
  • 33.05
  • 32.06
  • 30.86
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.57e4
  • 1.57e4
47.47
  • 47.47
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.69e4
  • 1.69e4
  • 1.69e4
43.48
  • 43.48
  • 43.43
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.72e4
  • 1.72e4
42.39
  • 42.39
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.72e4
  • 1.72e4
42.32
  • 42.32
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.80e4
  • 1.80e4
39.89
  • 39.89
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.00e4
  • 2.00e4
32.93
  • 32.93
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBX322595
EnsemblENSDARG00000042908 (hsh2d)
Uniprot/SPTREMBLF1QBJ1, F1QBJ1_DANRE
ZFINZDB-GENE-050410-3 (hsh2d)

Do not show this banner again