D. rerio Gene: ctgfa - ENSDARG00000042934 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000042934
Namectgfa
Descriptionconnective tissue growth factor a [Source:ZFIN;Acc:ZDB-GENE-030131-102]
OrganismDanio rerio (zebrafish)
Synonym(s)ctgf, ctgf {eco:0000313|embl:aai15210.1,gn eco:0000313|zfin:zdb-gene-030131-102}, hm:zeh1559, si:dkey-266k12.4, wu:fl25c03, zctgf-c20, zgc:136644

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
554
  • 554
98.15
  • 98.15
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
782
  • 782
  • 7.47e3
97.38
  • 97.38
  • 75.00
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
878
  • 878
97.06
  • 97.06
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.04e3
  • 1.04e3
96.51
  • 96.51
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000033Hatching:Long-pec
1.24e3
  • 1.24e3
  • 2.76e3
  • 9.96e3
  • 1.15e4
  • 1.42e4
95.86
  • 95.86
  • 90.76
  • 66.67
  • 61.51
  • 52.60
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
1.44e3
  • 1.44e3
  • 6.90e3
  • 1.12e4
95.18
  • 95.18
  • 76.89
  • 62.50
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
1.56e3
  • 1.56e3
  • 1.87e3
  • 2.25e3
  • 2.96e3
  • 3.02e3
94.76
  • 94.76
  • 93.75
  • 92.48
  • 90.08
  • 89.91
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.91e3
  • 1.91e3
  • 3.49e3
93.60
  • 93.60
  • 88.33
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
2.76e3
  • 2.76e3
90.76
  • 90.76
AEIR
  • AEIR
UBERON:0008895splanchnocranium
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
3.73e3
  • 3.73e3
  • 5.97e3
87.50
  • 87.50
  • 80.00
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
3.80e3
  • 3.80e3
87.27
  • 87.27
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
3.98e3
  • 3.98e3
86.67
  • 86.67
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
4.04e3
  • 4.04e3
86.48
  • 86.48
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
4.14e3
  • 4.14e3
86.15
  • 86.15
AEIR
  • AEIR
UBERON:0000151pectoral fin
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000036Larval:Day 4
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000034Hatching:Pec-fin
4.67e3
  • 4.67e3
  • 6.40e3
  • 9.96e3
  • 9.96e3
  • 1.49e4
84.37
  • 84.37
  • 78.57
  • 66.67
  • 66.65
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
4.98e3
  • 4.98e3
83.34
  • 83.34
AEIR
  • AEIR
UBERON:0003079floor plate
  • ZFS:0000037Larval:Day 5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000027Segmentation:20-25 somites
4.98e3
  • 4.98e3
  • 8.30e3
  • 9.34e3
  • 1.03e4
  • 1.10e4
  • 1.12e4
  • 1.12e4
  • 1.16e4
  • 1.19e4
  • 1.19e4
  • 1.24e4
  • 1.26e4
83.34
  • 83.34
  • 72.22
  • 68.74
  • 65.37
  • 63.32
  • 62.49
  • 62.49
  • 61.10
  • 59.99
  • 59.99
  • 58.32
  • 57.68
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001042chordate pharynx
  • ZFS:0000035Larval:Protruding-mouth
5.97e3
  • 5.97e3
80.00
  • 80.00
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0000104life cycle
6.97e3
  • 6.97e3
  • 7.12e3
  • 8.22e3
  • 1.49e4
76.66
  • 76.66
  • 76.18
  • 72.48
  • 49.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002291central canal of spinal cord
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
7.47e3
  • 7.47e3
  • 7.47e3
75.00
  • 75.00
  • 75.00
AEIR
  • AEIR
  • AEIR
UBERON:0002328notochord
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
7.47e3
  • 7.47e3
  • 1.05e4
  • 1.34e4
75.00
  • 75.00
  • 64.99
  • 54.97
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
7.66e3
  • 7.66e3
74.35
  • 74.35
AEIR
  • AEIR
UBERON:0001846internal ear
  • ZFS:0000033Hatching:Long-pec
8.30e3
  • 8.30e3
72.22
  • 72.22
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
8.58e3
  • 8.58e3
  • 9.96e3
  • 1.01e4
  • 1.30e4
  • 1.46e4
  • 1.50e4
71.28
  • 71.28
  • 66.65
  • 66.10
  • 56.38
  • 51.12
  • 49.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003051ear vesicle
  • ZFS:0000031Pharyngula:Prim-25
8.83e3
  • 8.83e3
70.44
  • 70.44
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
8.96e3
  • 8.96e3
70.01
  • 70.01
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
8.96e3
  • 8.96e3
  • 1.20e4
  • 1.25e4
  • 1.29e4
69.98
  • 69.98
  • 59.98
  • 58.30
  • 56.86
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
9.65e3
  • 9.65e3
67.67
  • 67.67
AEIR
  • AEIR
ZFA:0000003adaxial cell (Danio)
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
9.96e3
  • 9.96e3
  • 1.33e4
66.67
  • 66.67
  • 55.53
AEIR
  • AEIR
  • AEIR
UBERON:0003922pancreatic epithelial bud
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000030Pharyngula:Prim-15
9.96e3
  • 9.96e3
  • 1.09e4
  • 1.12e4
  • 1.24e4
66.66
  • 66.66
  • 63.63
  • 62.49
  • 58.32
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
9.97e3
  • 9.97e3
66.61
  • 66.61
AEIR
  • AEIR
UBERON:0002100trunk
  • ZFS:0000029Pharyngula:Prim-5
1.07e4
  • 1.07e4
64.28
  • 64.28
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000029Pharyngula:Prim-5
1.12e4
  • 1.12e4
62.50
  • 62.50
AEIR
  • AEIR
UBERON:0001264pancreas
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
1.12e4
  • 1.12e4
  • 1.16e4
62.49
  • 62.49
  • 61.10
AEIR
  • AEIR
  • AEIR
UBERON:0002539pharyngeal arch
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
1.15e4
  • 1.15e4
  • 1.21e4
61.53
  • 61.53
  • 59.36
AEIR
  • AEIR
  • AEIR
UBERON:0003921pancreas primordium
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
1.15e4
  • 1.15e4
  • 1.22e4
  • 1.24e4
61.53
  • 61.53
  • 59.08
  • 58.32
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003082myotome
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
1.16e4
  • 1.16e4
  • 1.18e4
  • 1.20e4
  • 1.25e4
61.09
  • 61.09
  • 60.50
  • 59.98
  • 58.31
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000926mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.20e4
  • 1.20e4
59.98
  • 59.98
AEIR
  • AEIR
UBERON:2001073axial vasculature
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000034Hatching:Pec-fin
1.24e4
  • 1.24e4
  • 1.49e4
58.33
  • 58.33
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.25e4
  • 1.25e4
58.19
  • 58.19
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.33e4
  • 1.33e4
55.44
  • 55.44
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • UBERON:0000066fully formed stage
1.38e4
  • 1.38e4
53.89
  • 53.89
AEIR
  • AEIR
UBERON:0000925endoderm
  • ZFS:0000028Segmentation:26+ somites
1.38e4
  • 1.38e4
53.83
  • 53.83
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.46e4
  • 1.46e4
51.14
  • 51.14
AEIR
  • AEIR
UBERON:0003066pharyngeal arch 2
  • ZFS:0000036Larval:Day 4
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0004362pharyngeal arch 1
  • ZFS:0000036Larval:Day 4
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0011242ethmoid cartilage
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
1.49e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 50.00
  • 49.99
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003107Meckel's cartilage
  • ZFS:0000036Larval:Day 4
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
1.65e4
  • 1.65e4
44.90
  • 44.90
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

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