D. rerio Gene: camk2d1 - ENSDARG00000043010 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000043010
Namecamk2d1
Descriptioncalcium/calmodulin-dependent protein kinase (CaM kinase) II delta 1 [Source:ZFIN;Acc:ZDB-GENE-040801-121]
OrganismDanio rerio (zebrafish)
Synonym(s)a8kbp0, camk2db, wu:fc54g06, zgc:101001, zgc:173815

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.75e3
  • 1.75e3
  • 5.14e3
94.13441
  • 94.13441
  • 82.79768
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.96e3
  • 1.96e3
  • 3.50e3
93.43000
  • 93.43000
  • 88.29585
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000024Segmentation:5-9 somites
2.22e3
  • 2.22e3
  • 2.85e3
  • 3.27e3
  • 3.69e3
  • 8.00e3
  • 8.42e3
  • 1.27e4
  • 1.29e4
  • 1.35e4
  • 1.44e4
92.57610
  • 92.57610
  • 90.44778
  • 89.04708
  • 87.65847
  • 73.20782
  • 71.80310
  • 57.48334
  • 56.92807
  • 54.93785
  • 51.85916
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.97e3
  • 2.97e3
90.05602
  • 90.05602
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
3.50e3
  • 3.50e3
88.27311
  • 88.27311
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
3.60e3
  • 3.60e3
87.93544
  • 87.93544
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
4.67e3
  • 4.67e3
  • 1.21e4
84.35147
  • 84.35147
  • 59.37947
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
4.70e3
  • 4.70e3
84.26816
  • 84.26816
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
4.92e3
  • 4.92e3
83.51917
  • 83.51917
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
7.27e3
  • 7.27e3
75.65603
  • 75.65603
AEIR
  • AEIR
UBERON:0002100trunk
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
7.47e3
  • 7.47e3
  • 9.96e3
75.00000
  • 75.00000
  • 66.66668
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
7.64e3
  • 7.64e3
74.41315
  • 74.41315
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
8.65e3
  • 8.65e3
  • 9.48e3
  • 1.22e4
71.03396
  • 71.03396
  • 68.24783
  • 59.23300
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
8.70e3
  • 8.70e3
70.87700
  • 70.87700
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
9.28e3
  • 9.28e3
  • 9.62e3
68.92379
  • 68.92379
  • 67.79091
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
9.38e3
  • 9.38e3
  • 9.93e3
  • 1.08e4
  • 1.12e4
  • 1.12e4
  • 1.14e4
  • 1.15e4
  • 1.18e4
  • 1.22e4
  • 1.24e4
  • 1.33e4
68.60627
  • 68.60627
  • 66.75270
  • 63.83903
  • 62.55735
  • 62.51432
  • 61.83977
  • 61.63346
  • 60.40428
  • 59.23748
  • 58.34742
  • 55.49771
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.04e4
  • 1.04e4
65.27368
  • 65.27368
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000109gastrula stage
1.06e4
  • 1.06e4
  • 1.69e4
  • 1.75e4
64.38486
  • 64.38486
  • 43.57536
  • 41.42327
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.19824
  • 60.19824
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
59.80002
  • 59.80002
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.23e4
  • 1.23e4
58.72478
  • 58.72478
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.25e4
  • 1.25e4
  • 1.32e4
58.17697
  • 58.17697
  • 55.73388
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
57.30837
  • 57.30837
AEIR
  • AEIR
UBERON:0001890forebrain
  • ZFS:0000033Hatching:Long-pec
1.29e4
  • 1.29e4
56.64826
  • 56.64826
AEIR
  • AEIR
UBERON:0002538hatching gland
  • ZFS:0000029Pharyngula:Prim-5
1.38e4
  • 1.38e4
53.82942
  • 53.82942
AEIR
  • AEIR
UBERON:0001003skin epidermis
  • ZFS:0000029Pharyngula:Prim-5
1.42e4
  • 1.42e4
52.35080
  • 52.35080
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.45e4
  • 1.45e4
51.58544
  • 51.58544
AEIR
  • AEIR
UBERON:2000610vertical myoseptum
  • ZFS:0000026Segmentation:14-19 somites
1.49e4
  • 1.49e4
50.00167
  • 50.00167
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.53e4
  • 1.53e4
48.78575
  • 48.78575
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.93e4
  • 1.93e4
35.35154
  • 35.35154
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

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