D. rerio Gene: napgb - ENSDARG00000043012 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000043012
Namenapgb
DescriptionN-ethylmaleimide-sensitive factor attachment protein, gamma b [Source:ZFIN;Acc:ZDB-GENE-040718-171]
OrganismDanio rerio (zebrafish)
Synonym(s)cb476, napg, zgc:92890
Orthologs(s)10 orthologs
Paralog(s)5 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.16e3
  • 1.16e3
  • 9.89e3
96.13
  • 96.13
  • 66.89
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.72e3
  • 1.72e3
94.23
  • 94.23
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.29e3
  • 2.29e3
92.34
  • 92.34
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
3.40e3
  • 3.40e3
  • 4.46e3
  • 1.25e4
  • 1.38e4
  • 2.01e4
88.62
  • 88.62
  • 85.07
  • 58.25
  • 53.89
  • 32.57
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
4.40e3
  • 4.40e3
85.28
  • 85.28
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
6.86e3
  • 6.86e3
77.05
  • 77.05
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
8.10e3
  • 8.10e3
72.86
  • 72.86
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
8.46e3
  • 8.46e3
71.66
  • 71.66
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
9.98e3
  • 9.98e3
  • 1.03e4
66.60
  • 66.60
  • 65.51
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
1.08e4
  • 1.08e4
  • 1.57e4
63.91
  • 63.91
  • 47.34
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.12e4
  • 1.12e4
  • 1.36e4
62.57
  • 62.57
  • 54.30
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.38e4
  • 1.38e4
  • 1.60e4
53.85
  • 53.85
  • 46.52
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
50.33
  • 50.33
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.55e4
  • 1.55e4
47.99
  • 47.99
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.58e4
  • 1.58e4
47.11
  • 47.11
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.61e4
  • 1.61e4
45.97
  • 45.97
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.69e4
  • 1.69e4
43.52
  • 43.52
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.83e4
  • 1.83e4
38.68
  • 38.68
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.00e4
  • 2.00e4
32.90
  • 32.90
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.02e4
  • 2.02e4
32.40
  • 32.40
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.10e4
  • 2.10e4
29.68
  • 29.68
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Bilateria7 species10 genesCompare expression

Orthology information comes from OMA : ENSDARG00000043012.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Neopterygii1 geneCompare expression
Eukaryota5 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000043012.

Cross-references

EnsemblENSDARG00000043012 (napgb)
ZFINZDB-GENE-040718-171 (napgb)
EMBLCABZ01050275, CABZ01050276, CABZ01050277
Uniprot/SPTREMBLF1R9L7, F1R9L7_DANRE

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