D. rerio Gene: alox5b.2 - ENSDARG00000043089 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000043089
Namealox5b.2
Descriptionarachidonate 5-lipoxygenase b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060623-19]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:136911
Orthologs(s)53 orthologs
Paralog(s)6 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.31e3
  • 2.31e3
92.26
  • 92.26
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
5.41e3
  • 5.41e3
81.89
  • 81.89
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.52e3
  • 8.52e3
71.49
  • 71.49
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
54.98
  • 54.98
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
1.52e4
  • 1.52e4
49.00
  • 49.00
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.56e4
  • 1.56e4
47.60
  • 47.60
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.57e4
  • 1.57e4
47.39
  • 47.39
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.65e4
  • 1.65e4
44.64
  • 44.64
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
1.65e4
  • 1.65e4
  • 2.38e4
  • 2.41e4
44.63
  • 44.63
  • 20.36
  • 19.19
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.69e4
  • 1.69e4
43.48
  • 43.48
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.78e4
  • 1.78e4
40.35
  • 40.35
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.84e4
  • 1.84e4
38.51
  • 38.51
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.85e4
  • 1.85e4
38.00
  • 38.00
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.01e4
  • 2.01e4
32.79
  • 32.79
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.01e4
  • 2.01e4
32.70
  • 32.70
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi18 species53 genesCompare expression

Orthology information comes from OMA : ENSDARG00000043089.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Neopterygii2 genesCompare expression
Chordata6 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000043089.

Cross-references

EnsemblENSDARG00000043089 (alox5b.2)
ZFINZDB-GENE-060623-19 (alox5b.2)
EMBLBX000999
Uniprot/SPTREMBLX1WD38, X1WD38_DANRE

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