D. rerio Gene: dnajb13 - ENSDARG00000043157 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000043157
Namednajb13
DescriptionDnaJ (Hsp40) homolog, subfamily B, member 13 [Source:ZFIN;Acc:ZDB-GENE-040910-4]
OrganismDanio rerio (zebrafish)
Synonym(s)tsarg6, tsr6, zgc:110276
Orthologs(s)18 orthologs
Paralog(s)10 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000066fully formed stage
500
  • 500
98.33
  • 98.33
AEIR
  • AEIR
UBERON:2000001Kupffer's vesicle
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
7.47e3
  • 7.47e3
  • 8.04e3
  • 8.04e3
74.99
  • 74.99
  • 73.07
  • 73.07
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003079floor plate
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
8.30e3
  • 8.30e3
  • 8.30e3
  • 8.96e3
72.22
  • 72.22
  • 72.22
  • 69.99
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003060pronephric duct
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000028Segmentation:26+ somites
9.13e3
  • 9.13e3
  • 1.12e4
  • 1.12e4
  • 1.20e4
  • 1.20e4
  • 1.26e4
69.43
  • 69.43
  • 62.48
  • 62.48
  • 59.98
  • 59.98
  • 57.87
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003069otic placode
  • ZFS:0000026Segmentation:14-19 somites
9.44e3
  • 9.44e3
68.40
  • 68.40
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000022Gastrula:Bud
9.96e3
  • 9.96e3
66.65
  • 66.65
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
1.05e4
  • 1.05e4
  • 1.16e4
  • 1.17e4
  • 1.22e4
64.99
  • 64.99
  • 61.10
  • 60.70
  • 59.08
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001891midbrain
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
1.10e4
  • 1.10e4
  • 1.17e4
63.32
  • 63.32
  • 60.70
AEIR
  • AEIR
  • AEIR
UBERON:0000004nose
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
1.14e4
  • 1.14e4
  • 1.14e4
  • 1.21e4
  • 1.23e4
61.75
  • 61.75
  • 61.75
  • 59.36
  • 58.80
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
1.15e4
  • 1.15e4
  • 1.17e4
  • 1.22e4
  • 1.27e4
  • 1.27e4
61.34
  • 61.34
  • 60.68
  • 59.06
  • 57.47
  • 57.47
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001894diencephalon
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
1.17e4
  • 1.17e4
  • 1.18e4
  • 1.22e4
  • 1.23e4
  • 1.26e4
60.84
  • 60.84
  • 60.39
  • 59.06
  • 58.67
  • 57.87
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003050olfactory placode
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
1.20e4
  • 1.20e4
  • 1.25e4
  • 1.25e4
59.98
  • 59.98
  • 58.31
  • 58.31
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001997olfactory epithelium
  • UBERON:0000104life cycle
1.29e4
  • 1.29e4
56.94
  • 56.94
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
55.00
  • 55.00
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.35e4
  • 1.35e4
54.71
  • 54.71
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.57e4
  • 1.57e4
47.56
  • 47.56
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.59e4
  • 1.59e4
  • 1.98e4
46.93
  • 46.93
  • 33.58
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
1.61e4
  • 1.61e4
  • 1.65e4
  • 1.66e4
  • 1.89e4
  • 2.12e4
45.96
  • 45.96
  • 44.74
  • 44.48
  • 36.60
  • 29.05
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.65e4
  • 1.65e4
44.65
  • 44.65
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.68e4
  • 1.68e4
43.72
  • 43.72
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.68e4
  • 1.68e4
43.63
  • 43.63
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.69e4
  • 1.69e4
43.54
  • 43.54
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.69e4
  • 1.69e4
  • 2.11e4
43.50
  • 43.50
  • 29.23
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
1.74e4
  • 1.74e4
41.77
  • 41.77
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.84e4
  • 1.84e4
38.35
  • 38.35
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.98e4
  • 1.98e4
33.68
  • 33.68
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Opisthokonta5 genesCompare expression
Eukaryota10 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000043157.

Cross-references

EnsemblENSDARG00000043157 (dnajb13)
ZFINZDB-GENE-040910-4 (dnajb13)
EMBLAL845435, BC152131
Uniprot/SPTREMBLA7MCD0, A7MCD0_DANRE

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