D. rerio Gene: si:dkey-222f2.1 - ENSDARG00000043242 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000043242
Namesi:dkey-222f2.1
Descriptionsi:dkey-222f2.1 [Source:ZFIN;Acc:ZDB-GENE-050208-726]
OrganismDanio rerio (zebrafish)
Synonym(s)krtt2c22

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
2.58e3
  • 2.58e3
  • 5.20e3
91.36
  • 91.36
  • 82.58
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
5.30e3
  • 5.30e3
  • 5.46e3
  • 6.25e3
  • 6.53e3
  • 6.66e3
82.25
  • 82.25
  • 81.72
  • 79.08
  • 78.12
  • 77.69
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
6.95e3
  • 6.95e3
  • 1.01e4
76.74
  • 76.74
  • 66.33
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
7.89e3
  • 7.89e3
  • 8.71e3
73.57
  • 73.57
  • 70.83
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
8.19e3
  • 8.19e3
72.59
  • 72.59
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
63.72
  • 63.72
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.31e4
  • 1.31e4
56.03
  • 56.03
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
1.31e4
  • 1.31e4
55.97
  • 55.97
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.39e4
  • 1.39e4
53.56
  • 53.56
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.41e4
  • 1.41e4
52.66
  • 52.66
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
1.62e4
  • 1.62e4
  • 1.66e4
45.84
  • 45.84
  • 44.25
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.74e4
  • 1.74e4
41.63
  • 41.63
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.77e4
  • 1.77e4
40.78
  • 40.78
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.87e4
  • 1.87e4
37.36
  • 37.36
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.89e4
  • 1.89e4
36.86
  • 36.86
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.93e4
  • 1.93e4
35.49
  • 35.49
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.02e4
  • 2.02e4
32.45
  • 32.45
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.13e4
  • 2.13e4
28.79
  • 28.79
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLBX005329
EnsemblENSDARG00000043242 (si:dkey-222f2.1)
Uniprot/SPTREMBLF1RDG4, F1RDG4_DANRE
ZFINZDB-GENE-050208-726 (si:dkey-222f2.1)

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