D. rerio Gene: xylb - ENSDARG00000043260 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000043260
Namexylb
Descriptionxylulokinase homolog (H. influenzae) [Source:ZFIN;Acc:ZDB-GENE-040426-1373]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:64119

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.94e3
  • 1.94e3
93.52
  • 93.52
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
2.74e3
  • 2.74e3
  • 1.12e4
  • 1.21e4
90.83
  • 90.83
  • 62.48
  • 59.50
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
3.71e3
  • 3.71e3
87.59
  • 87.59
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
8.12e3
  • 8.12e3
  • 1.07e4
72.81
  • 72.81
  • 64.26
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
9.97e3
  • 9.97e3
  • 1.67e4
66.63
  • 66.63
  • 44.01
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.67
  • 64.67
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
1.14e4
  • 1.14e4
  • 1.20e4
  • 1.29e4
  • 1.41e4
61.88
  • 61.88
  • 59.98
  • 56.65
  • 52.75
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
  • 1.80e4
60.81
  • 60.81
  • 39.66
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
58.99
  • 58.99
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.25e4
  • 1.25e4
58.30
  • 58.30
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
57.94
  • 57.94
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
1.31e4
  • 1.31e4
  • 1.38e4
  • 1.44e4
  • 1.64e4
  • 1.86e4
56.28
  • 56.28
  • 53.92
  • 51.65
  • 45.11
  • 37.63
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.47e4
  • 1.47e4
50.91
  • 50.91
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.49e4
  • 1.49e4
50.24
  • 50.24
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
50.22
  • 50.22
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
50.13
  • 50.13
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.57e4
  • 1.57e4
  • 2.06e4
47.34
  • 47.34
  • 31.13
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.58e4
  • 1.58e4
47.24
  • 47.24
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.58e4
  • 1.58e4
  • 1.87e4
47.15
  • 47.15
  • 37.55
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.58e4
  • 1.58e4
46.94
  • 46.94
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.60e4
  • 1.60e4
46.55
  • 46.55
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.61e4
  • 1.61e4
46.10
  • 46.10
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.76e4
  • 1.76e4
40.94
  • 40.94
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.13e4
  • 2.13e4
28.70
  • 28.70
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EnsemblENSDARG00000043260 (xylb)
Uniprot/SPTREMBLF1R3W7, F1R3W7_DANRE
ZFINZDB-GENE-040426-1373 (xylb)

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