D. rerio Gene: morc3b - ENSDARG00000043271 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000043271
Namemorc3b
DescriptionMORC family CW-type zinc finger 3b [Source:ZFIN;Acc:ZDB-GENE-040801-98]
OrganismDanio rerio (zebrafish)
Synonym(s)cb561, sb:cb561, sb:cb69, zgc:101052

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
2.77e3
  • 2.77e3
90.74
  • 90.74
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
2.94e3
  • 2.94e3
  • 1.75e4
90.15
  • 90.15
  • 41.28
AEIR
  • AEIR
  • AEIR
UBERON:2000083ventral mesoderm
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
4.98e3
  • 4.98e3
  • 4.98e3
  • 5.27e3
  • 5.34e3
83.33
  • 83.33
  • 83.33
  • 82.35
  • 82.14
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004128optic vesicle
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
7.47e3
  • 7.47e3
  • 8.40e3
  • 9.19e3
74.99
  • 74.99
  • 71.86
  • 69.22
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003071eye primordium
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
8.54e3
  • 8.54e3
  • 9.19e3
  • 9.19e3
71.42
  • 71.42
  • 69.22
  • 69.22
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.21e4
  • 1.21e4
59.36
  • 59.36
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000029Pharyngula:Prim-5
1.28e4
  • 1.28e4
  • 1.34e4
  • 1.49e4
57.12
  • 57.12
  • 54.97
  • 49.97
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.35e4
  • 1.35e4
54.80
  • 54.80
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.57e4
  • 1.57e4
47.32
  • 47.32
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
1.82e4
  • 1.82e4
  • 1.89e4
  • 1.98e4
39.09
  • 39.09
  • 36.71
  • 33.80
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.02e4
  • 2.02e4
32.52
  • 32.52
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.02e4
  • 2.02e4
32.34
  • 32.34
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.05e4
  • 2.05e4
31.40
  • 31.40
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.12e4
  • 2.12e4
29.14
  • 29.14
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
2.16e4
  • 2.16e4
27.79
  • 27.79
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.17e4
  • 2.17e4
27.25
  • 27.25
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EnsemblENSDARG00000043271 (morc3b)
ZFINZDB-GENE-040801-98 (morc3b)
EMBLBX276127
Uniprot/SPTREMBLB8A4L4, B8A4L4_DANRE, B8A4L5, B8A4L5_DANRE

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