D. rerio Gene: MRPL55 - ENSDARG00000043402 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000043402
NameMRPL55
Descriptionzgc:171480 [Source:ZFIN;Acc:ZDB-GENE-080204-83]
OrganismDanio rerio (zebrafish)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.86e3
  • 1.86e3
93.76
  • 93.76
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
2.19e3
  • 2.19e3
92.68
  • 92.68
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
2.30e3
  • 2.30e3
92.31
  • 92.31
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.44e3
  • 2.44e3
91.82
  • 91.82
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
  • ZFS:0000035Larval:Protruding-mouth
2.73e3
  • 2.73e3
  • 3.03e3
  • 1.21e4
90.85
  • 90.85
  • 89.85
  • 59.59
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.78e3
  • 2.78e3
90.70
  • 90.70
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
2.81e3
  • 2.81e3
  • 6.03e3
90.59
  • 90.59
  • 79.83
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.85e3
  • 2.85e3
90.45
  • 90.45
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
3.02e3
  • 3.02e3
89.88
  • 89.88
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000031Pharyngula:Prim-25
3.14e3
  • 3.14e3
  • 3.49e3
  • 4.04e3
  • 5.21e3
  • 5.90e3
  • 7.64e3
  • 8.00e3
  • 8.52e3
  • 8.87e3
  • 1.23e4
89.50
  • 89.50
  • 88.32
  • 86.47
  • 82.57
  • 80.25
  • 74.42
  • 73.21
  • 71.47
  • 70.29
  • 58.69
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
3.47e3
  • 3.47e3
88.38
  • 88.38
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000109gastrula stage
3.69e3
  • 3.69e3
  • 5.03e3
  • 7.22e3
  • 7.27e3
  • 7.67e3
  • 8.93e3
87.64
  • 87.64
  • 83.14
  • 75.84
  • 75.66
  • 74.32
  • 70.11
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
4.06e3
  • 4.06e3
86.39
  • 86.39
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
4.16e3
  • 4.16e3
86.07
  • 86.07
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
4.18e3
  • 4.18e3
85.99
  • 85.99
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
4.20e3
  • 4.20e3
  • 1.47e4
85.94
  • 85.94
  • 50.88
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
4.37e3
  • 4.37e3
  • 6.06e3
  • 8.28e3
  • 8.39e3
  • 9.52e3
85.36
  • 85.36
  • 79.70
  • 72.26
  • 71.91
  • 68.14
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
4.47e3
  • 4.47e3
85.04
  • 85.04
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
4.57e3
  • 4.57e3
84.69
  • 84.69
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
4.65e3
  • 4.65e3
84.43
  • 84.43
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
4.75e3
  • 4.75e3
84.10
  • 84.10
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000104life cycle
4.85e3
  • 4.85e3
  • 7.44e3
  • 1.49e4
83.76
  • 83.76
  • 75.09
  • 49.94
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
5.32e3
  • 5.32e3
82.20
  • 82.20
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
  • UBERON:0000106zygote stage
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
6.10e3
  • 6.10e3
  • 6.37e3
  • 6.38e3
  • 6.46e3
  • 6.48e3
  • 6.62e3
  • 6.73e3
  • 6.76e3
  • 6.91e3
  • 7.03e3
  • 7.43e3
  • 7.54e3
  • 1.03e4
  • 1.10e4
  • 1.44e4
  • 1.50e4
79.57
  • 79.57
  • 78.66
  • 78.64
  • 78.39
  • 78.32
  • 77.84
  • 77.46
  • 77.35
  • 76.87
  • 76.45
  • 75.14
  • 74.75
  • 65.52
  • 63.22
  • 51.88
  • 49.80
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
6.30e3
  • 6.30e3
78.91
  • 78.91
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
6.45e3
  • 6.45e3
  • 7.67e3
  • 8.72e3
78.39
  • 78.39
  • 74.32
  • 70.81
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
8.89e3
  • 8.89e3
70.23
  • 70.23
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
9.20e3
  • 9.20e3
69.21
  • 69.21
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
9.22e3
  • 9.22e3
  • 9.92e3
  • 1.06e4
  • 1.06e4
69.14
  • 69.14
  • 66.78
  • 64.56
  • 64.41
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
9.36e3
  • 9.36e3
68.66
  • 68.66
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
9.55e3
  • 9.55e3
  • 1.11e4
68.02
  • 68.02
  • 62.85
AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
9.78e3
  • 9.78e3
67.24
  • 67.24
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.20
  • 64.20
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
1.34e4
  • 1.34e4
55.16
  • 55.16
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLBX005425
EnsemblENSDARG00000043402 (MRPL55)
HGNCHGNC:16686 (MRPL55)
Uniprot/SPTREMBLA8WHP2, A8WHP2_DANRE
ZFINZDB-GENE-080204-83 (zgc:171480)

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