D. rerio Gene: slc8a1b - ENSDARG00000043406 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000043406
Nameslc8a1b
Descriptionsolute carrier family 8 (sodium/calcium exchanger), member 1b [Source:ZFIN;Acc:ZDB-GENE-060110-3]
OrganismDanio rerio (zebrafish)
Synonym(s)e9qgw4, ncx1b, ncx1n

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000468multi-cellular organism
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0000104life cycle
2.55e3
  • 2.55e3
  • 1.50e4
91.46
  • 91.46
  • 49.92
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
5.80e3
  • 5.80e3
80.58
  • 80.58
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
5.89e3
  • 5.89e3
  • 1.22e4
  • 1.34e4
80.30
  • 80.30
  • 59.08
  • 54.99
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
6.45e3
  • 6.45e3
78.40
  • 78.40
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
6.81e3
  • 6.81e3
77.21
  • 77.21
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
7.13e3
  • 7.13e3
  • 8.07e3
76.13
  • 76.13
  • 72.99
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
8.20e3
  • 8.20e3
72.53
  • 72.53
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
9.20e3
  • 9.20e3
69.19
  • 69.19
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
9.28e3
  • 9.28e3
  • 1.09e4
  • 1.33e4
  • 1.64e4
  • 1.66e4
68.93
  • 68.93
  • 63.60
  • 55.49
  • 44.98
  • 44.26
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
9.68e3
  • 9.68e3
67.57
  • 67.57
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.07e4
  • 1.07e4
  • 1.54e4
64.14
  • 64.14
  • 48.45
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.21e4
  • 1.21e4
59.55
  • 59.55
AEIR
  • AEIR
UBERON:0001049neural tube
  • ZFS:0000029Pharyngula:Prim-5
1.30e4
  • 1.30e4
56.49
  • 56.49
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.30e4
  • 1.30e4
56.35
  • 56.35
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.31e4
  • 1.31e4
56.04
  • 56.04
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.40e4
  • 1.40e4
53.21
  • 53.21
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.51e4
  • 1.51e4
49.48
  • 49.48
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.51e4
  • 1.51e4
49.38
  • 49.38
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.56e4
  • 1.56e4
  • 1.79e4
47.91
  • 47.91
  • 40.13
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.58e4
  • 1.58e4
47.10
  • 47.10
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.70e4
  • 1.70e4
42.95
  • 42.95
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.08e4
  • 2.08e4
30.32
  • 30.32
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

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