D. rerio Gene: vamp4 - ENSDARG00000043510 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000043510
Namevamp4
Descriptionvesicle-associated membrane protein 4 [Source:ZFIN;Acc:ZDB-GENE-040625-92]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:73166, zgc:86855

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
325
  • 325
98.92
  • 98.92
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
539
  • 539
98.20
  • 98.20
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.86e3
  • 1.86e3
93.76
  • 93.76
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
2.39e3
  • 2.39e3
  • 3.91e3
92.01
  • 92.01
  • 86.90
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
2.60e3
  • 2.60e3
  • 4.22e3
91.31
  • 91.31
  • 85.86
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
2.75e3
  • 2.75e3
  • 3.87e3
90.78
  • 90.78
  • 87.04
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
3.30e3
  • 3.30e3
  • 3.70e3
  • 4.87e3
  • 5.49e3
  • 6.14e3
88.94
  • 88.94
  • 87.62
  • 83.70
  • 81.63
  • 79.44
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
3.95e3
  • 3.95e3
86.78
  • 86.78
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
4.10e3
  • 4.10e3
86.27
  • 86.27
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
4.13e3
  • 4.13e3
86.18
  • 86.18
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
4.19e3
  • 4.19e3
85.96
  • 85.96
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.35e3
  • 4.35e3
85.45
  • 85.45
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
4.50e3
  • 4.50e3
  • 1.46e4
84.94
  • 84.94
  • 51.07
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
4.54e3
  • 4.54e3
84.79
  • 84.79
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
4.66e3
  • 4.66e3
84.39
  • 84.39
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
4.85e3
  • 4.85e3
83.75
  • 83.75
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
5.28e3
  • 5.28e3
82.33
  • 82.33
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
5.50e3
  • 5.50e3
81.58
  • 81.58
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
5.90e3
  • 5.90e3
  • 1.50e4
80.26
  • 80.26
  • 49.92
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
6.15e3
  • 6.15e3
79.40
  • 79.40
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
6.26e3
  • 6.26e3
  • 6.96e3
79.03
  • 79.03
  • 76.71
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
6.41e3
  • 6.41e3
78.55
  • 78.55
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
6.66e3
  • 6.66e3
77.71
  • 77.71
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
7.03e3
  • 7.03e3
  • 7.15e3
76.47
  • 76.47
  • 76.06
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
8.15e3
  • 8.15e3
72.71
  • 72.71
AEIR
  • AEIR
UBERON:0001017central nervous system
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
1.03e4
  • 1.03e4
  • 1.07e4
  • 1.17e4
  • 1.20e4
  • 1.34e4
  • 1.41e4
  • 1.41e4
65.37
  • 65.37
  • 64.27
  • 60.70
  • 59.98
  • 55.24
  • 52.92
  • 52.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

Do not show this banner again