Gene: si:dkey-239i20.2 - ENSDARG00000043518 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000043518
Name	si:dkey-239i20.2
Description	si:dkey-239i20.2 [Source:ZFIN;Acc:ZDB-GENE-041001-98]
Organism	Danio rerio (zebrafish)
Synonym(s)	si:ch211-191d7.2, zgc:171329

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0002107	liver	[+] 1 stage UBERON:0000066fully formed stage	825 825	97.24 97.24	AEIR AEIR
UBERON:0000160	intestine	[+] 1 stage UBERON:0000066fully formed stage	1.25e3 1.25e3	95.82 95.82	AEIR AEIR
UBERON:0002106	spleen	[+] 1 stage UBERON:0000066fully formed stage	4.83e3 4.83e3	83.84 83.84	AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	4.85e3 4.85e3	83.75 83.75	AEIR AEIR
UBERON:0003982	mature ovarian follicle	[+] 1 stage UBERON:0000066fully formed stage	8.49e3 8.49e3	71.57 71.57	AEIR AEIR
CL:0000094	granulocyte	[+] 1 stage UBERON:0000066fully formed stage	9.08e3 9.08e3	69.60 69.60	AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	9.19e3 9.19e3	69.22 69.22	AEIR AEIR
UBERON:0004734	gastrula	[+] 2 stages ZFS:0000022Gastrula:Bud ZFS:0000019Gastrula:Shield	1.05e4 1.05e4 1.50e4	64.92 64.92 49.88	AEIR AEIR AEIR
UBERON:0002548	larva	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000069larval stage	1.06e4 1.06e4 1.56e4	64.49 64.49 47.87	AEIR AEIR AEIR
UBERON:0000922	embryo	[+] 5 stages UBERON:0004707pharyngula stage ZFS:0000029Pharyngula:Prim-5 UBERON:0000068embryo stage ZFS:0000037Larval:Day 5 ZFS:0000033Hatching:Long-pec	1.07e4 1.07e4 1.22e4 1.39e4 1.46e4 1.95e4	64.12 64.12 59.27 53.51 51.17 34.61	AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0019248	early embryo	[+] 1 stage UBERON:0000107cleavage stage	1.08e4 1.08e4	63.69 63.69	AEIR AEIR
UBERON:0002385	muscle tissue	[+] 1 stage UBERON:0000066fully formed stage	1.12e4 1.12e4	62.63 62.63	AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	1.16e4 1.16e4	61.05 61.05	AEIR AEIR
UBERON:0006860	swim bladder	[+] 1 stage UBERON:0000066fully formed stage	1.16e4 1.16e4	61.00 61.00	AEIR AEIR
UBERON:0000948	heart	[+] 1 stage UBERON:0000066fully formed stage	1.22e4 1.22e4	59.13 59.13	AEIR AEIR
UBERON:0000307	blastula	[+] 2 stages ZFS:0000011Blastula:1k-cell ZFS:0000015Blastula:Dome	1.37e4 1.37e4 1.61e4	54.19 54.19 46.06	AEIR AEIR AEIR
UBERON:0000206	pharyngeal gill	[+] 1 stage UBERON:0000066fully formed stage	1.37e4 1.37e4	54.07 54.07	AEIR AEIR
UBERON:0001630	muscle organ	[+] 1 stage UBERON:0000066fully formed stage	1.39e4 1.39e4	53.53 53.53	AEIR AEIR
UBERON:0000033	head	[+] 2 stages UBERON:0000066fully formed stage ZFS:0000037Larval:Day 5	1.62e4 1.62e4 1.83e4	45.74 45.74 38.63	AEIR AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000066fully formed stage	1.63e4 1.63e4	45.32 45.32	AEIR AEIR
UBERON:0000970	eye	[+] 1 stage ZFS:0000031Pharyngula:Prim-25	1.68e4 1.68e4	43.85 43.85	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	2.06e4 2.06e4	30.98 30.98	AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	2.09e4 2.09e4	30.15 30.15	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Cross-references

EMBL	BX255937
Ensembl	ENSDARG00000043518 (si:dkey-239i20.2)
Uniprot/SPTREMBL	Q5TZD3, Q5TZD3_DANRE
ZFIN	ZDB-GENE-041001-98 (si:dkey-239i20.2)