D. rerio Gene: bcas2 - ENSDARG00000043631 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000043631
Namebcas2
Descriptionbreast carcinoma amplified sequence 2 [Source:ZFIN;Acc:ZDB-GENE-030408-5]
OrganismDanio rerio (zebrafish)
Synonym(s)cb302, zgc:101730

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
160
  • 160
99.47
  • 99.47
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
336
  • 336
98.88
  • 98.88
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
541
  • 541
  • 688
  • 1.10e3
  • 1.15e3
  • 1.26e3
  • 1.43e3
98.19
  • 98.19
  • 97.70
  • 96.32
  • 96.17
  • 95.78
  • 95.23
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
648
  • 648
  • 657
  • 1.46e3
  • 1.53e3
  • 2.25e3
97.83
  • 97.83
  • 97.80
  • 95.13
  • 94.87
  • 92.47
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • UBERON:0000109gastrula stage
  • ZFS:0000049segmentation
789
  • 789
  • 921
  • 991
  • 1.09e3
  • 1.09e3
  • 1.16e3
  • 1.79e3
  • 1.87e3
  • 2.41e3
  • 3.37e3
  • 3.49e3
  • 4.15e3
  • 4.24e3
  • 5.38e3
  • 1.38e4
  • 1.45e4
  • 1.47e4
  • 1.49e4
  • 1.49e4
97.36
  • 97.36
  • 96.92
  • 96.68
  • 96.34
  • 96.34
  • 96.13
  • 94.03
  • 93.74
  • 91.93
  • 88.71
  • 88.32
  • 86.11
  • 85.80
  • 82.00
  • 53.84
  • 51.56
  • 50.90
  • 49.99
  • 49.95
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
949
  • 949
96.83
  • 96.83
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
960
  • 960
96.79
  • 96.79
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0000068embryo stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
983
  • 983
  • 1.04e3
  • 1.19e3
  • 1.34e3
  • 1.38e3
  • 1.48e3
  • 1.72e3
  • 2.12e3
  • 2.62e3
  • 4.16e3
96.71
  • 96.71
  • 96.51
  • 96.01
  • 95.52
  • 95.37
  • 95.05
  • 94.24
  • 92.89
  • 91.24
  • 86.09
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.18e3
  • 1.18e3
96.05
  • 96.05
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.39e3
  • 1.39e3
95.34
  • 95.34
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.42e3
  • 1.42e3
95.26
  • 95.26
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.44e3
  • 1.44e3
95.17
  • 95.17
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.64e3
  • 1.64e3
  • 3.27e3
  • 1.49e4
94.50
  • 94.50
  • 89.06
  • 49.94
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.68e3
  • 1.68e3
94.36
  • 94.36
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.98e3
  • 1.98e3
  • 3.38e3
93.38
  • 93.38
  • 88.68
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.99e3
  • 1.99e3
93.33
  • 93.33
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
2.08e3
  • 2.08e3
  • 3.57e3
93.02
  • 93.02
  • 88.03
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
2.14e3
  • 2.14e3
  • 2.53e3
92.84
  • 92.84
  • 91.53
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
2.18e3
  • 2.18e3
92.70
  • 92.70
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
2.41e3
  • 2.41e3
  • 3.27e3
  • 4.36e3
91.93
  • 91.93
  • 89.05
  • 85.41
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.42e3
  • 2.42e3
91.92
  • 91.92
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.45e3
  • 2.45e3
91.80
  • 91.80
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
2.46e3
  • 2.46e3
  • 1.50e4
91.76
  • 91.76
  • 49.92
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000032Pharyngula:High-pec
2.49e3
  • 2.49e3
  • 2.83e3
  • 4.79e3
  • 5.24e3
  • 1.17e4
  • 1.20e4
91.67
  • 91.67
  • 90.52
  • 83.97
  • 82.47
  • 60.84
  • 59.98
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.59e3
  • 2.59e3
91.34
  • 91.34
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
2.75e3
  • 2.75e3
90.81
  • 90.81
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.85e3
  • 2.85e3
90.47
  • 90.47
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.94e3
  • 2.94e3
90.17
  • 90.17
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
3.32e3
  • 3.32e3
88.87
  • 88.87
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
3.71e3
  • 3.71e3
87.58
  • 87.58
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
4.11e3
  • 4.11e3
86.23
  • 86.23
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
4.13e3
  • 4.13e3
86.18
  • 86.18
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
6.89e3
  • 6.89e3
  • 8.54e3
  • 8.79e3
  • 8.79e3
  • 8.96e3
  • 9.13e3
  • 9.13e3
  • 9.13e3
  • 9.71e3
76.92
  • 76.92
  • 71.41
  • 70.57
  • 70.57
  • 69.98
  • 69.43
  • 69.43
  • 69.43
  • 67.48
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
8.54e3
  • 8.54e3
  • 8.54e3
  • 9.34e3
71.42
  • 71.42
  • 71.42
  • 68.74
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005426lens vesicle
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
9.67e3
  • 9.67e3
  • 1.03e4
  • 1.05e4
67.63
  • 67.63
  • 65.61
  • 64.98
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2001357alar plate midbrain
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
1.05e4
  • 1.05e4
  • 1.10e4
  • 1.10e4
64.98
  • 64.98
  • 63.14
  • 63.14
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004128optic vesicle
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
1.05e4
  • 1.05e4
  • 1.05e4
  • 1.05e4
64.69
  • 64.69
  • 64.69
  • 64.69
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2000083ventral mesoderm
  • ZFS:0000026Segmentation:14-19 somites
1.05e4
  • 1.05e4
64.69
  • 64.69
AEIR
  • AEIR
UBERON:0001945superior colliculus
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
1.07e4
  • 1.07e4
  • 1.10e4
  • 1.10e4
  • 1.18e4
  • 1.23e4
  • 1.25e4
  • 1.25e4
64.26
  • 64.26
  • 63.14
  • 63.14
  • 60.50
  • 58.80
  • 58.31
  • 58.31
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
  • 1.50e4
57.14
  • 57.14
  • 49.94
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBC085427
EnsemblENSDARG00000043631 (bcas2)
Uniprot/SWISSPROTQ5RKQ0, SPF27_DANRE
ZFINZDB-GENE-030408-5 (bcas2)

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