Gene: pnck - ENSDARG00000043648 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000043648
Name	pnck
Description	pregnancy up-regulated nonubiquitous CaM kinase [Source:ZFIN;Acc:ZDB-GENE-081105-127]
Organism	Danio rerio (zebrafish)
Synonym(s)	si:dkey-7i23.2
Orthologs(s)	15 orthologs
Paralog(s)	17 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000160	intestine	[+] 1 stage UBERON:0000066fully formed stage	1.42e4 1.42e4	52.60 52.60	AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	1.47e4 1.47e4	50.80 50.80	AEIR AEIR
UBERON:0006860	swim bladder	[+] 1 stage UBERON:0000066fully formed stage	1.73e4 1.73e4	42.12 42.12	AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	1.84e4 1.84e4	38.50 38.50	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000066fully formed stage	1.89e4 1.89e4	36.75 36.75	AEIR AEIR
UBERON:0000033	head	[+] 1 stage UBERON:0000066fully formed stage	1.98e4 1.98e4	33.81 33.81	AEIR AEIR
UBERON:0002385	muscle tissue	[+] 1 stage UBERON:0000066fully formed stage	2.00e4 2.00e4	32.91 32.91	AEIR AEIR
UBERON:0002548	larva	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000069larval stage	2.17e4 2.17e4 2.88e4	27.48 27.48 3.49	AEIR AEIR AEIR
UBERON:0000922	embryo	[+] 1 stage ZFS:0000037Larval:Day 5	2.20e4 2.20e4	26.31 26.31	AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	2.32e4 2.32e4	22.30 22.30	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	2.45e4 2.45e4	17.93 17.93	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Euteleostomi	15 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Monodelphis domestica (opossum) Anolis carolinensis (green anole) Xenopus tropicalis (western clawed frog)	15 genes ENSG00000130822 PNCK ENSMUSG00000002012 Pnck ENSPTRG00000022404 PNCK ENSGGOG00000005546 PNCK ENSMMUG00000010585 PNCK ENSRNOG00000058317 Pnck ENSBTAG00000017430 PNCK ENSSSCG00000012773 PNCK ENSOCUG00000002399 PNCK ENSCAFG00000019242 PNCK ENSFCAG00000004035 PNCK ENSCPOG00000013014 PNCK ENSMODG00000008192 PNCK ENSACAG00000008973 PNCK ENSXETG00000007699 pnck	Compare expression	[+]

Orthology information comes from OMA : ENSDARG00000043648.

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Opisthokonta	17 genes ENSDARG00000006609 map2k2a ENSDARG00000007825 map2k1 ENSDARG00000017446 camk1db ENSDARG00000017994 tssk6 ENSDARG00000029474 camk1b ENSDARG00000052923 zgc:113162 ENSDARG00000058869 NEK3 ENSDARG00000060116 camk1a ENSDARG00000063583 map2k4a ENSDARG00000068918 map2k2b ENSDARG00000074905 camk1da ENSDARG00000077177 map2k4b ENSDARG00000095902 si:ch211-57m13.10 ENSDARG00000097795 si:ch73-195i19.3 ENSDARG00000099184 map2k6 ENSDARG00000104153 zgc:175248 ENSDARG00000104676 prkd2	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000043648.

Cross-references

Ensembl	ENSDARG00000043648 (pnck)
ZFIN	ZDB-GENE-081105-127 (pnck)
EMBL	BX284664
Uniprot/SPTREMBL	B0S5N5, B0S5N5_DANRE