D. rerio Gene: faub - ENSDARG00000043663 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000043663
Namefaub
DescriptionFinkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed b [Source:ZFIN;Acc:ZDB-GENE-050417-416]
OrganismDanio rerio (zebrafish)
Synonym(s)im:7142593, zgc:110695

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
394
  • 394
98.68
  • 98.68
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
644
  • 644
  • 677
  • 735
  • 952
  • 1.00e3
97.85
  • 97.85
  • 97.74
  • 97.54
  • 96.82
  • 96.64
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
716
  • 716
97.61
  • 97.61
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
837
  • 837
97.20
  • 97.20
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.04e3
  • 1.04e3
96.53
  • 96.53
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
1.21e3
  • 1.21e3
  • 1.92e3
  • 1.99e3
  • 2.24e3
  • 2.50e3
  • 6.07e3
95.94
  • 95.94
  • 93.58
  • 93.35
  • 92.49
  • 91.63
  • 79.68
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.27e3
  • 1.27e3
95.74
  • 95.74
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.28e3
  • 1.28e3
95.73
  • 95.73
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.29e3
  • 1.29e3
95.68
  • 95.68
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.36e3
  • 1.36e3
95.45
  • 95.45
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.61e3
  • 1.61e3
94.63
  • 94.63
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.86e3
  • 1.86e3
93.78
  • 93.78
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000042Juvenile:Days 30-44
  • UBERON:0000106zygote stage
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
2.25e3
  • 2.25e3
  • 2.53e3
  • 2.54e3
  • 2.57e3
  • 2.78e3
  • 2.96e3
  • 3.52e3
  • 3.84e3
  • 4.11e3
  • 4.89e3
  • 5.44e3
  • 7.34e3
  • 8.17e3
  • 9.10e3
92.47
  • 92.47
  • 91.54
  • 91.49
  • 91.38
  • 90.70
  • 90.11
  • 88.23
  • 87.16
  • 86.25
  • 83.63
  • 81.80
  • 75.44
  • 72.63
  • 69.52
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
2.30e3
  • 2.30e3
92.32
  • 92.32
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
2.73e3
  • 2.73e3
90.86
  • 90.86
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.81e3
  • 2.81e3
90.61
  • 90.61
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.98e3
  • 2.98e3
90.02
  • 90.02
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
3.04e3
  • 3.04e3
89.83
  • 89.83
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
3.04e3
  • 3.04e3
89.81
  • 89.81
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
3.10e3
  • 3.10e3
89.62
  • 89.62
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000068embryo stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
3.13e3
  • 3.13e3
  • 3.29e3
  • 4.01e3
  • 4.07e3
  • 6.24e3
  • 6.68e3
  • 7.38e3
  • 8.46e3
  • 1.01e4
  • 1.04e4
89.52
  • 89.52
  • 88.98
  • 86.57
  • 86.38
  • 79.12
  • 77.64
  • 75.28
  • 71.68
  • 66.29
  • 65.24
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
3.25e3
  • 3.25e3
  • 3.45e3
89.11
  • 89.11
  • 88.45
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
3.26e3
  • 3.26e3
89.09
  • 89.09
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
3.55e3
  • 3.55e3
88.10
  • 88.10
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
3.81e3
  • 3.81e3
  • 6.18e3
87.24
  • 87.24
  • 79.29
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
3.87e3
  • 3.87e3
  • 4.35e3
  • 7.35e3
87.05
  • 87.05
  • 85.45
  • 75.38
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
4.59e3
  • 4.59e3
84.64
  • 84.64
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
4.71e3
  • 4.71e3
84.24
  • 84.24
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
5.11e3
  • 5.11e3
82.89
  • 82.89
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
5.39e3
  • 5.39e3
  • 9.27e3
  • 9.47e3
  • 1.07e4
81.95
  • 81.95
  • 68.97
  • 68.30
  • 64.08
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • UBERON:0000106zygote stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000015Blastula:Dome
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000026Segmentation:14-19 somites
6.40e3
  • 6.40e3
  • 6.40e3
  • 6.40e3
  • 6.64e3
  • 6.89e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.97e3
  • 8.53e3
  • 8.54e3
  • 8.71e3
  • 8.79e3
  • 8.79e3
  • 8.96e3
  • 8.96e3
  • 9.13e3
  • 9.13e3
  • 9.13e3
  • 9.71e3
  • 9.96e3
  • 9.96e3
78.57
  • 78.57
  • 78.57
  • 78.57
  • 77.77
  • 76.92
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 73.32
  • 71.43
  • 71.41
  • 70.82
  • 70.57
  • 70.57
  • 69.99
  • 69.98
  • 69.43
  • 69.43
  • 69.43
  • 67.48
  • 66.66
  • 66.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
6.84e3
  • 6.84e3
  • 9.11e3
77.11
  • 77.11
  • 69.51
AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
7.14e3
  • 7.14e3
76.10
  • 76.10
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
7.29e3
  • 7.29e3
  • 8.43e3
75.58
  • 75.58
  • 71.77
AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
9.05e3
  • 9.05e3
69.70
  • 69.70
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBX248510
EnsemblENSDARG00000043663 (faub)
Uniprot/SPTREMBLF1RA98, F1RA98_DANRE
ZFINZDB-GENE-050417-416 (faub)

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