D. rerio Gene: BEGAIN - ENSDARG00000043673 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000043673
NameBEGAIN
Descriptionsi:dkey-174m14.3 [Source:ZFIN;Acc:ZDB-GENE-030131-8158]
OrganismDanio rerio (zebrafish)
Synonym(s)fj56d07, kiaa1446, wu:fj56d07

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • ZFS:0000031Pharyngula:Prim-25
2.51e3
  • 2.51e3
  • 1.49e4
  • 1.80e4
91.58
  • 91.58
  • 49.94
  • 39.86
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
3.46e3
  • 3.46e3
  • 8.77e3
88.41
  • 88.41
  • 70.65
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
6.02e3
  • 6.02e3
  • 1.65e4
79.83
  • 79.83
  • 44.78
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
6.96e3
  • 6.96e3
  • 1.52e4
  • 2.00e4
  • 2.02e4
  • 2.02e4
76.71
  • 76.71
  • 48.95
  • 32.95
  • 32.37
  • 32.21
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
8.34e3
  • 8.34e3
  • 1.22e4
  • 1.22e4
  • 1.45e4
  • 1.79e4
  • 1.81e4
72.07
  • 72.07
  • 59.26
  • 59.24
  • 51.46
  • 40.18
  • 39.42
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
9.61e3
  • 9.61e3
  • 1.24e4
  • 1.43e4
67.82
  • 67.82
  • 58.32
  • 52.12
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000019camera-type eye
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.94
  • 49.94
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.59e4
  • 1.59e4
  • 1.74e4
46.71
  • 46.71
  • 41.86
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.63e4
  • 1.63e4
45.46
  • 45.46
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.66e4
  • 1.66e4
44.27
  • 44.27
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.70e4
  • 1.70e4
43.22
  • 43.22
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.77
  • 40.77
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.79e4
  • 1.79e4
40.15
  • 40.15
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.80e4
  • 1.80e4
39.88
  • 39.88
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.32e4
  • 2.32e4
22.43
  • 22.43
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLBX936423
EnsemblENSDARG00000043673 (BEGAIN)
HGNCHGNC:24163 (BEGAIN)
Uniprot/SPTREMBLF1Q634, F1Q634_DANRE, Q5TYR3, Q5TYR3_DANRE
ZFINZDB-GENE-030131-8158 (si:dkey-174m14.3)

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