D. rerio Gene: nabp1b - ENSDARG00000043685 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000043685
Namenabp1b
Descriptionnucleic acid binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-050913-74]
OrganismDanio rerio (zebrafish)
Synonym(s)obfc2ab, zgc:114087

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
944
  • 944
96.84
  • 96.84
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.30e3
  • 2.30e3
92.30
  • 92.30
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
3.33e3
  • 3.33e3
  • 1.06e4
88.85
  • 88.85
  • 64.58
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
4.13e3
  • 4.13e3
  • 4.96e3
86.19
  • 86.19
  • 83.38
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
5.31e3
  • 5.31e3
82.24
  • 82.24
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
5.77e3
  • 5.77e3
  • 9.96e3
  • 1.22e4
  • 1.24e4
80.67
  • 80.67
  • 66.65
  • 59.08
  • 58.32
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
8.38e3
  • 8.38e3
71.96
  • 71.96
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
8.45e3
  • 8.45e3
71.71
  • 71.71
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
9.92e3
  • 9.92e3
66.77
  • 66.77
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
65.93
  • 65.93
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.24e4
  • 1.24e4
58.34
  • 58.34
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
50.18
  • 50.18
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.68e4
  • 1.68e4
43.81
  • 43.81
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.37e4
  • 2.37e4
20.65
  • 20.65
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EMBLCU571254
EnsemblENSDARG00000043685 (nabp1b)
Uniprot/SPTREMBLF1RA89, F1RA89_DANRE
ZFINZDB-GENE-050913-74 (nabp1b)

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