D. rerio Gene: srek1ip1 - ENSDARG00000043728 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000043728
Namesrek1ip1
DescriptionSREK1-interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-051030-24]
OrganismDanio rerio (zebrafish)
Synonym(s)q5bjc5, sfrs12ip1, zgc:123019

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.91e3
  • 1.91e3
93.60
  • 93.60
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
1.98e3
  • 1.98e3
  • 3.18e3
93.37
  • 93.37
  • 89.35
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.92e3
  • 2.92e3
90.21
  • 90.21
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
2.93e3
  • 2.93e3
  • 4.71e3
90.21
  • 90.21
  • 84.22
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
3.26e3
  • 3.26e3
89.08
  • 89.08
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
3.76e3
  • 3.76e3
  • 7.52e3
87.40
  • 87.40
  • 74.83
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
3.81e3
  • 3.81e3
87.23
  • 87.23
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
3.85e3
  • 3.85e3
  • 4.54e3
  • 4.70e3
  • 5.64e3
  • 6.53e3
87.10
  • 87.10
  • 84.81
  • 84.25
  • 81.12
  • 78.13
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
3.98e3
  • 3.98e3
  • 1.23e4
86.67
  • 86.67
  • 58.94
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
5.13e3
  • 5.13e3
82.81
  • 82.81
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
5.32e3
  • 5.32e3
  • 8.39e3
82.18
  • 82.18
  • 71.89
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
7.73e3
  • 7.73e3
74.12
  • 74.12
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
7.76e3
  • 7.76e3
74.01
  • 74.01
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
7.87e3
  • 7.87e3
73.66
  • 73.66
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
7.95e3
  • 7.95e3
73.37
  • 73.37
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
8.71e3
  • 8.71e3
70.82
  • 70.82
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
8.96e3
  • 8.96e3
70.01
  • 70.01
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
8.97e3
  • 8.97e3
69.96
  • 69.96
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
9.28e3
  • 9.28e3
68.94
  • 68.94
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
9.53e3
  • 9.53e3
68.08
  • 68.08
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.23
  • 65.23
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.68
  • 64.68
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.35
  • 64.35
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.07
  • 64.07
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.14e4
  • 1.14e4
61.73
  • 61.73
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLBC091537, BC107616
EnsemblENSDARG00000043728 (srek1ip1)
Uniprot/SWISSPROTQ3B7G7, SR1IP_DANRE
ZFINZDB-GENE-051030-24 (srek1ip1)

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