D. rerio Gene: si:dkey-88n24.5 - ENSDARG00000043735 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000043735
Namesi:dkey-88n24.5
Descriptionsi:dkey-88n24.5 [Source:ZFIN;Acc:ZDB-GENE-041014-85]
OrganismDanio rerio (zebrafish)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
3.85e3
  • 3.85e3
  • 6.27e3
87.11
  • 87.11
  • 79.00
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
4.70e3
  • 4.70e3
84.28
  • 84.28
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
5.69e3
  • 5.69e3
80.94
  • 80.94
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
6.25e3
  • 6.25e3
79.06
  • 79.06
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
6.37e3
  • 6.37e3
78.68
  • 78.68
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
7.18e3
  • 7.18e3
  • 1.03e4
  • 1.24e4
  • 1.32e4
  • 1.58e4
75.95
  • 75.95
  • 65.50
  • 58.31
  • 55.71
  • 47.22
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
7.65e3
  • 7.65e3
74.38
  • 74.38
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
7.89e3
  • 7.89e3
  • 1.38e4
73.57
  • 73.57
  • 53.88
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
9.63e3
  • 9.63e3
67.77
  • 67.77
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.40
  • 64.40
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
63.71
  • 63.71
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.04
  • 62.04
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
59.98
  • 59.98
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.20e4
  • 1.20e4
59.93
  • 59.93
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.25e4
  • 1.25e4
58.04
  • 58.04
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.29e4
  • 1.29e4
56.80
  • 56.80
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.30e4
  • 1.30e4
56.51
  • 56.51
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.39e4
  • 1.39e4
  • 1.91e4
53.51
  • 53.51
  • 35.89
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.44e4
  • 1.44e4
51.62
  • 51.62
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.48e4
  • 1.48e4
  • 1.54e4
50.45
  • 50.45
  • 48.44
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.70e4
  • 1.70e4
43.21
  • 43.21
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.78e4
  • 1.78e4
40.50
  • 40.50
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.98e4
  • 1.98e4
33.66
  • 33.66
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSDARG00000043735 (si:dkey-88n24.5)
ZFINZDB-GENE-041014-85 (si:dkey-88n24.5)
EMBLBX284672
Uniprot/SPTREMBLE9QIP7, E9QIP7_DANRE

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