D. rerio Gene: PSMB10 - ENSDARG00000043781 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000043781
NamePSMB10
Descriptionzgc:92791 [Source:ZFIN;Acc:ZDB-GENE-040718-278]
OrganismDanio rerio (zebrafish)
Synonym(s)beta2i, lmp10, mecl1, mgc1665

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.02e3
  • 1.02e3
96.60
  • 96.60
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.35e3
  • 1.35e3
95.50
  • 95.50
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.36e3
  • 1.36e3
95.46
  • 95.46
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.72e3
  • 1.72e3
94.24
  • 94.24
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.79e3
  • 1.79e3
94.01
  • 94.01
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.33e3
  • 2.33e3
92.21
  • 92.21
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.51e3
  • 2.51e3
91.60
  • 91.60
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.83e3
  • 2.83e3
90.53
  • 90.53
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
3.31e3
  • 3.31e3
88.91
  • 88.91
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
3.66e3
  • 3.66e3
87.75
  • 87.75
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
3.95e3
  • 3.95e3
86.78
  • 86.78
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
4.71e3
  • 4.71e3
  • 1.15e4
  • 1.22e4
  • 1.51e4
84.22
  • 84.22
  • 61.57
  • 59.20
  • 49.55
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
4.71e3
  • 4.71e3
84.22
  • 84.22
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
4.80e3
  • 4.80e3
83.95
  • 83.95
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
5.38e3
  • 5.38e3
  • 9.29e3
81.99
  • 81.99
  • 68.91
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
5.48e3
  • 5.48e3
  • 1.17e4
81.67
  • 81.67
  • 60.89
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000033Hatching:Long-pec
5.59e3
  • 5.59e3
  • 9.97e3
  • 1.01e4
  • 1.06e4
  • 1.08e4
  • 1.11e4
  • 1.35e4
  • 1.40e4
  • 1.41e4
  • 1.56e4
81.28
  • 81.28
  • 66.61
  • 66.11
  • 64.51
  • 63.90
  • 62.69
  • 54.75
  • 53.26
  • 52.86
  • 47.89
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • ZFS:0000031Pharyngula:Prim-25
6.26e3
  • 6.26e3
  • 1.49e4
  • 1.62e4
79.03
  • 79.03
  • 49.94
  • 45.64
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
6.49e3
  • 6.49e3
78.26
  • 78.26
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
8.05e3
  • 8.05e3
73.04
  • 73.04
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
8.07e3
  • 8.07e3
  • 8.54e3
  • 8.61e3
  • 9.57e3
  • 1.07e4
  • 1.10e4
72.99
  • 72.99
  • 71.42
  • 71.17
  • 67.95
  • 64.06
  • 63.10
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000040Larval:Days 14-20
  • UBERON:0000106zygote stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
8.59e3
  • 8.59e3
  • 8.99e3
  • 9.06e3
  • 9.32e3
  • 9.32e3
  • 9.35e3
  • 9.64e3
  • 9.90e3
  • 1.04e4
  • 1.06e4
  • 1.15e4
  • 1.29e4
  • 1.46e4
  • 1.51e4
71.25
  • 71.25
  • 69.89
  • 69.67
  • 68.79
  • 68.79
  • 68.68
  • 67.71
  • 66.85
  • 65.09
  • 64.66
  • 61.53
  • 56.90
  • 51.06
  • 49.51
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
9.10e3
  • 9.10e3
69.52
  • 69.52
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
9.26e3
  • 9.26e3
  • 1.09e4
  • 1.11e4
  • 1.19e4
  • 1.19e4
68.99
  • 68.99
  • 63.48
  • 62.94
  • 60.30
  • 60.26
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.07e4
  • 1.07e4
64.02
  • 64.02
AEIR
  • AEIR
UBERON:0001997olfactory epithelium
  • UBERON:0000104life cycle
1.10e4
  • 1.10e4
63.21
  • 63.21
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.07
  • 63.07
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.22e4
  • 1.22e4
59.13
  • 59.13
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
  • 1.50e4
55.16
  • 55.16
  • 49.94
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.36e4
  • 1.36e4
  • 1.44e4
  • 1.48e4
54.45
  • 54.45
  • 51.71
  • 50.36
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.72e4
  • 1.72e4
42.37
  • 42.37
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLCU467646
EnsemblENSDARG00000043781 (PSMB10)
HGNCHGNC:9538 (PSMB10)
Uniprot/SPTREMBLF1QR78, F1QR78_DANRE
ZFINZDB-GENE-040718-278 (zgc:92791)

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