D. rerio Gene: ms4a17a.7 - ENSDARG00000043796 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000043796
Namems4a17a.7
Descriptionmembrane-spanning 4-domains, subfamily A, member 17A.7 [Source:ZFIN;Acc:ZDB-GENE-080829-2]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:112186

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
6.38e3
  • 6.38e3
  • 1.08e4
78.64
  • 78.64
  • 63.82
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
6.45e3
  • 6.45e3
78.42
  • 78.42
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
7.82e3
  • 7.82e3
73.81
  • 73.81
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.13e4
  • 1.13e4
62.21
  • 62.21
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
1.31e4
  • 1.31e4
  • 1.39e4
  • 1.43e4
  • 1.63e4
  • 1.73e4
55.98
  • 55.98
  • 53.52
  • 52.24
  • 45.53
  • 42.23
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.40e4
  • 1.40e4
  • 1.45e4
53.19
  • 53.19
  • 51.41
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
  • 2.00e4
50.14
  • 50.14
  • 32.95
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.55e4
  • 1.55e4
48.26
  • 48.26
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.61e4
  • 1.61e4
46.06
  • 46.06
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.76e4
  • 1.76e4
41.04
  • 41.04
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.93e4
  • 1.93e4
35.49
  • 35.49
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.08e4
  • 2.08e4
30.31
  • 30.31
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.08e4
  • 2.08e4
30.28
  • 30.28
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.09e4
  • 2.09e4
29.88
  • 29.88
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSDARG00000043796 (ms4a17a.7)
ZFINZDB-GENE-080829-2 (ms4a17a.7)
EMBLCU694374
Uniprot/SPTREMBLF1QTD0, F1QTD0_DANRE

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