Gene: CLEC17A (1 to many) - ENSDARG00000043894 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000043894
Name	CLEC17A (1 to many)
Description	si:ch211-214k5.3 [Source:ZFIN;Acc:ZDB-GENE-041210-206]
Organism	Danio rerio (zebrafish)
Synonym(s)	flj45910
Paralog(s)	6 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	1.07e4 1.07e4	64.13 64.13	AEIR AEIR
UBERON:0006860	swim bladder	[+] 1 stage UBERON:0000066fully formed stage	1.29e4 1.29e4	56.87 56.87	AEIR AEIR
UBERON:0000966	retina	[+] 1 stage ZFS:0000037Larval:Day 5	1.36e4 1.36e4	54.55 54.55	AEIR AEIR
UBERON:0000948	heart	[+] 1 stage UBERON:0000066fully formed stage	1.71e4 1.71e4	42.67 42.67	AEIR AEIR
CL:0000094	granulocyte	[+] 1 stage UBERON:0000066fully formed stage	1.72e4 1.72e4	42.30 42.30	AEIR AEIR
UBERON:0002106	spleen	[+] 1 stage UBERON:0000066fully formed stage	1.77e4 1.77e4	40.74 40.74	AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	1.78e4 1.78e4	40.51 40.51	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000066fully formed stage	1.86e4 1.86e4	37.76 37.76	AEIR AEIR
UBERON:0000206	pharyngeal gill	[+] 1 stage UBERON:0000066fully formed stage	2.01e4 2.01e4	32.63 32.63	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	2.07e4 2.07e4	30.69 30.69	AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	2.11e4 2.11e4	29.36 29.36	AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	2.19e4 2.19e4	26.60 26.60	AEIR AEIR
UBERON:0002548	larva	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000069larval stage	2.34e4 2.34e4 2.60e4	21.71 21.71 12.78	AEIR AEIR AEIR
UBERON:0000922	embryo	[+] 1 stage ZFS:0000037Larval:Day 5	2.51e4 2.51e4	15.86 15.86	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Clupeocephala	4 genes ENSDARG00000025547 si:ch73-343l4.6 ENSDARG00000076778 si:ch73-343l4.5 ENSDARG00000092502 si:ch73-343l4.3 ENSDARG00000095127 si:ch73-343l4.6	Compare expression	[+]
Neopterygii	6 genes ENSDARG00000008075 illr4 ENSDARG00000025547 si:ch73-343l4.6 ENSDARG00000076778 si:ch73-343l4.5 ENSDARG00000077975 si:ch73-343l4.8 ENSDARG00000092502 si:ch73-343l4.3 ENSDARG00000095127 si:ch73-343l4.6	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000043894.

Cross-references

Ensembl	ENSDARG00000043894 (CLEC17A (1 to many))
HGNC	HGNC:34520 (CLEC17A (1 to many))
ZFIN	ZDB-GENE-041210-206 (si:ch211-214k5.3)
Uniprot/SPTREMBL	F1QCW9, F1QCW9_DANRE, F1QR69, F1QR69_DANRE