D. rerio Gene: psma6l - ENSDARG00000043899 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000043899
Namepsma6l
Descriptionproteasome subunit alpha 6, like [Source:ZFIN;Acc:ZDB-GENE-010502-2]
OrganismDanio rerio (zebrafish)
Synonym(s)psma6b, zgc:91778

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
2.03e3
  • 2.03e3
93.22
  • 93.22
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.49e3
  • 2.49e3
91.68
  • 91.68
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.52e3
  • 2.52e3
91.58
  • 91.58
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
3.20e3
  • 3.20e3
89.28
  • 89.28
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
4.22e3
  • 4.22e3
85.86
  • 85.86
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • UBERON:0004707pharyngula stage
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • ZFS:0000036Larval:Day 4
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000106zygote stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
4.98e3
  • 4.98e3
  • 6.54e3
  • 6.64e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.97e3
  • 7.03e3
  • 7.47e3
  • 7.47e3
  • 7.91e3
  • 8.96e3
  • 8.96e3
  • 1.14e4
  • 1.37e4
  • 1.49e4
  • 1.50e4
  • 1.71e4
  • 1.77e4
  • 1.78e4
  • 1.78e4
  • 1.78e4
  • 1.78e4
  • 1.78e4
  • 1.80e4
  • 1.81e4
  • 1.83e4
83.33
  • 83.33
  • 78.12
  • 77.77
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 76.66
  • 76.46
  • 74.99
  • 74.99
  • 73.52
  • 69.99
  • 69.99
  • 61.67
  • 54.16
  • 50.25
  • 49.92
  • 42.80
  • 40.59
  • 40.53
  • 40.53
  • 40.40
  • 40.36
  • 40.34
  • 39.75
  • 39.40
  • 38.62
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
6.41e3
  • 6.41e3
78.54
  • 78.54
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
6.69e3
  • 6.69e3
77.61
  • 77.61
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
6.78e3
  • 6.78e3
77.32
  • 77.32
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
6.98e3
  • 6.98e3
76.62
  • 76.62
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
9.62e3
  • 9.62e3
67.79
  • 67.79
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
66.11
  • 66.11
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.34
  • 65.34
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.27
  • 65.27
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.28
  • 63.28
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.14e4
  • 1.14e4
  • 1.67e4
61.84
  • 61.84
  • 44.09
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.28
  • 59.28
AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
1.31e4
  • 1.31e4
  • 1.55e4
56.04
  • 56.04
  • 48.04
AEIR
  • AEIR
  • AEIR
UBERON:0001997olfactory epithelium
  • UBERON:0000104life cycle
1.33e4
  • 1.33e4
55.38
  • 55.38
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.39e4
  • 1.39e4
  • 1.52e4
  • 1.67e4
53.53
  • 53.53
  • 48.96
  • 44.20
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
1.43e4
  • 1.43e4
  • 1.70e4
  • 1.71e4
51.96
  • 51.96
  • 43.22
  • 42.65
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
1.54e4
  • 1.54e4
  • 2.04e4
  • 2.16e4
48.33
  • 48.33
  • 31.82
  • 27.70
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.72e4
  • 1.72e4
42.31
  • 42.31
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.76e4
  • 1.76e4
41.13
  • 41.13
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.97e4
  • 1.97e4
34.01
  • 34.01
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBC072719, BC165117, CU633848
EnsemblENSDARG00000043899 (psma6l)
Uniprot/SPTREMBLQ6GQM3, Q6GQM3_DANRE
ZFINZDB-GENE-010502-2 (psma6l)

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