D. rerio Gene: ACTL7A - ENSDARG00000043963 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000043963
NameACTL7A
Descriptionsi:ch211-241j12.3 [Source:ZFIN;Acc:ZDB-GENE-040724-72]
OrganismDanio rerio (zebrafish)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
312
  • 312
98.96
  • 98.96
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
898
  • 898
97.00
  • 97.00
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.48e3
  • 1.48e3
95.06
  • 95.06
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.69e3
  • 1.69e3
94.33
  • 94.33
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
3.51e3
  • 3.51e3
88.25
  • 88.25
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
3.76e3
  • 3.76e3
87.41
  • 87.41
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
4.55e3
  • 4.55e3
  • 7.14e3
84.77
  • 84.77
  • 76.10
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
8.22e3
  • 8.22e3
72.46
  • 72.46
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
8.47e3
  • 8.47e3
  • 1.09e4
71.64
  • 71.64
  • 63.39
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
1.00e4
  • 1.00e4
  • 1.14e4
  • 1.49e4
  • 1.50e4
  • 1.62e4
66.46
  • 66.46
  • 61.70
  • 49.96
  • 49.61
  • 45.85
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
63.43
  • 63.43
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.15e4
  • 1.15e4
61.34
  • 61.34
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
59.71
  • 59.71
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.37e4
  • 1.37e4
54.21
  • 54.21
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.38e4
  • 1.38e4
53.91
  • 53.91
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
1.44e4
  • 1.44e4
51.71
  • 51.71
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.51e4
  • 1.51e4
49.35
  • 49.35
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.53e4
  • 1.53e4
  • 1.93e4
48.69
  • 48.69
  • 35.33
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.54e4
  • 1.54e4
48.40
  • 48.40
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.59e4
  • 1.59e4
46.91
  • 46.91
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.60e4
  • 1.60e4
  • 1.88e4
46.58
  • 46.58
  • 37.03
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLBC139516, BX511077
EnsemblENSDARG00000043963 (ACTL7A)
HGNCHGNC:161 (ACTL7A)
Uniprot/SPTREMBLA4QNT8, A4QNT8_DANRE, F1QHI6, F1QHI6_DANRE, Q5RHJ0, Q5RHJ0_DANRE
ZFINZDB-GENE-040724-72 (si:ch211-241j12.3)

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