D. rerio Gene: efnb3a - ENSDARG00000044029 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000044029
Nameefnb3a
Descriptionephrin-B3a [Source:ZFIN;Acc:ZDB-GENE-100316-1]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch73-360o10.2
Orthologs(s)14 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
673
  • 673
97.75
  • 97.75
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
5.56e3
  • 5.56e3
81.37
  • 81.37
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
8.51e3
  • 8.51e3
  • 9.40e3
71.51
  • 71.51
  • 68.53
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
8.86e3
  • 8.86e3
  • 1.00e4
  • 1.07e4
  • 1.39e4
  • 1.48e4
70.34
  • 70.34
  • 66.51
  • 64.26
  • 53.41
  • 50.29
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
9.78e3
  • 9.78e3
  • 1.23e4
67.27
  • 67.27
  • 58.87
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.06e4
  • 1.06e4
  • 1.72e4
64.48
  • 64.48
  • 42.41
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.32e4
  • 1.32e4
55.70
  • 55.70
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.43e4
  • 1.43e4
52.25
  • 52.25
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.50e4
  • 1.50e4
  • 1.79e4
49.83
  • 49.83
  • 40.15
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.51e4
  • 1.51e4
  • 2.06e4
49.30
  • 49.30
  • 30.93
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.54e4
  • 1.54e4
48.43
  • 48.43
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.69e4
  • 1.69e4
43.54
  • 43.54
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.69e4
  • 1.69e4
43.37
  • 43.37
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.78e4
  • 1.78e4
40.28
  • 40.28
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.78e4
  • 1.78e4
40.25
  • 40.25
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.83e4
  • 1.83e4
38.57
  • 38.57
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.85e4
  • 1.85e4
37.94
  • 37.94
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.87e4
  • 1.87e4
37.23
  • 37.23
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.89e4
  • 1.89e4
36.74
  • 36.74
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.93e4
  • 1.93e4
35.33
  • 35.33
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.94e4
  • 1.94e4
35.16
  • 35.16
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.06e4
  • 2.06e4
30.88
  • 30.88
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.18e4
  • 2.18e4
26.94
  • 26.94
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Euteleostomi1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000044029.

Cross-references

EnsemblENSDARG00000044029 (efnb3a)
ZFINZDB-GENE-100316-1 (efnb3a)
EMBLAL844597, CU459123
Uniprot/SPTREMBLE7FG26, E7FG26_DANRE, F1RB71, F1RB71_DANRE

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