D. rerio Gene: slc18b1 - ENSDARG00000044047 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000044047
Nameslc18b1
Descriptionsolute carrier family 18, subfamily B, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-386]
OrganismDanio rerio (zebrafish)
Synonym(s)zc6orf192, zgc:110176

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
2.65e3
  • 2.65e3
  • 1.47e4
91.13
  • 91.13
  • 50.88
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000068embryo stage
5.43e3
  • 5.43e3
  • 6.22e3
  • 6.79e3
  • 1.50e4
81.81
  • 81.81
  • 79.16
  • 77.27
  • 49.80
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
6.39e3
  • 6.39e3
78.61
  • 78.61
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
7.80e3
  • 7.80e3
  • 1.12e4
73.89
  • 73.89
  • 62.49
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
8.41e3
  • 8.41e3
71.83
  • 71.83
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
8.42e3
  • 8.42e3
71.82
  • 71.82
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.00e4
  • 1.00e4
66.39
  • 66.39
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
65.78
  • 65.78
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.09e4
  • 1.09e4
  • 1.31e4
63.58
  • 63.58
  • 56.13
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.09e4
  • 1.09e4
  • 1.97e4
63.49
  • 63.49
  • 34.11
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.26e4
  • 1.26e4
57.67
  • 57.67
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.42e4
  • 1.42e4
52.47
  • 52.47
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.44e4
  • 1.44e4
51.92
  • 51.92
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.44e4
  • 1.44e4
  • 1.87e4
51.80
  • 51.80
  • 37.25
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
50.18
  • 50.18
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.60e4
  • 1.60e4
46.43
  • 46.43
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.61e4
  • 1.61e4
45.96
  • 45.96
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
1.63e4
  • 1.63e4
45.50
  • 45.50
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
1.67e4
  • 1.67e4
  • 1.69e4
  • 1.72e4
  • 1.84e4
  • 2.06e4
44.06
  • 44.06
  • 43.30
  • 42.34
  • 38.32
  • 31.10
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.85e4
  • 1.85e4
38.17
  • 38.17
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.99e4
  • 1.99e4
33.38
  • 33.38
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.25e4
  • 2.25e4
24.80
  • 24.80
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

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