D. rerio Gene: atpif1b - ENSDARG00000044092 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000044092
Nameatpif1b
DescriptionATPase inhibitory factor 1b [Source:ZFIN;Acc:ZDB-GENE-050506-113]
OrganismDanio rerio (zebrafish)
Synonym(s)atpib, if(1) b, if1 b, im:6908140, q0p476, si:ch211-154e15.5, si:ch211-15d5.5, zgc:153321

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
254
  • 254
  • 433
99.15
  • 99.15
  • 98.55
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
345
  • 345
98.85
  • 98.85
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
376
  • 376
98.74
  • 98.74
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
389
  • 389
98.70
  • 98.70
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000104life cycle
409
  • 409
  • 2.31e3
  • 1.20e4
98.63
  • 98.63
  • 92.25
  • 59.68
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
501
  • 501
98.33
  • 98.33
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
524
  • 524
98.25
  • 98.25
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
540
  • 540
98.19
  • 98.19
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
542
  • 542
  • 823
98.19
  • 98.19
  • 97.25
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
546
  • 546
98.18
  • 98.18
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
621
  • 621
  • 944
  • 1.04e3
  • 1.17e3
  • 1.33e3
  • 2.05e3
  • 2.08e3
  • 3.43e3
  • 5.79e3
  • 6.11e3
97.92
  • 97.92
  • 96.84
  • 96.52
  • 96.08
  • 95.55
  • 93.14
  • 93.05
  • 88.53
  • 80.61
  • 79.56
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
821
  • 821
97.25
  • 97.25
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
827
  • 827
97.23
  • 97.23
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
952
  • 952
96.82
  • 96.82
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
973
  • 973
96.75
  • 96.75
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.11e3
  • 1.11e3
96.29
  • 96.29
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
1.18e3
  • 1.18e3
  • 2.91e3
  • 3.68e3
  • 5.58e3
96.07
  • 96.07
  • 90.25
  • 87.69
  • 81.33
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.25e3
  • 1.25e3
95.83
  • 95.83
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.33e3
  • 1.33e3
95.56
  • 95.56
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.47e3
  • 1.47e3
  • 2.38e3
95.07
  • 95.07
  • 92.04
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
1.62e3
  • 1.62e3
  • 1.75e3
  • 2.63e3
94.56
  • 94.56
  • 94.14
  • 91.21
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.65e3
  • 1.65e3
94.49
  • 94.49
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000106zygote stage
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
1.69e3
  • 1.69e3
  • 1.90e3
  • 1.99e3
  • 2.49e3
  • 2.75e3
  • 2.86e3
  • 2.99e3
  • 7.44e3
  • 7.48e3
  • 8.95e3
  • 9.11e3
  • 9.14e3
  • 9.39e3
  • 1.19e4
  • 1.44e4
  • 1.46e4
94.33
  • 94.33
  • 93.66
  • 93.35
  • 91.67
  • 90.78
  • 90.42
  • 90.00
  • 75.07
  • 74.94
  • 70.03
  • 69.48
  • 69.41
  • 68.56
  • 60.26
  • 51.82
  • 51.12
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
3.95e3
  • 3.95e3
86.77
  • 86.77
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
4.56e3
  • 4.56e3
84.74
  • 84.74
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
5.52e3
  • 5.52e3
  • 6.19e3
  • 7.75e3
  • 8.28e3
  • 8.53e3
  • 9.23e3
81.53
  • 81.53
  • 79.28
  • 74.04
  • 72.29
  • 71.42
  • 69.09
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
5.60e3
  • 5.60e3
  • 7.25e3
  • 7.82e3
  • 9.06e3
  • 9.28e3
81.25
  • 81.25
  • 75.74
  • 73.81
  • 69.67
  • 68.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
6.40e3
  • 6.40e3
  • 6.97e3
  • 8.96e3
  • 9.96e3
  • 1.14e4
  • 1.20e4
  • 1.23e4
  • 1.25e4
  • 1.25e4
78.56
  • 78.56
  • 76.66
  • 69.99
  • 66.65
  • 61.88
  • 59.98
  • 58.80
  • 58.31
  • 58.31
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
7.83e3
  • 7.83e3
73.78
  • 73.78
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
8.34e3
  • 8.34e3
72.06
  • 72.06
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
9.54e3
  • 9.54e3
68.05
  • 68.05
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
9.68e3
  • 9.68e3
67.59
  • 67.59
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.01e4
  • 1.01e4
66.25
  • 66.25
AEIR
  • AEIR
UBERON:0005426lens vesicle
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000028Segmentation:26+ somites
1.14e4
  • 1.14e4
  • 1.20e4
  • 1.21e4
61.75
  • 61.75
  • 59.98
  • 59.36
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003082myotome
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
1.20e4
  • 1.20e4
  • 1.25e4
  • 1.25e4
59.98
  • 59.98
  • 58.31
  • 58.31
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
  • 1.42e4
57.14
  • 57.14
  • 52.57
AEIR
  • AEIR
  • AEIR
UBERON:2000058polster
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
1.33e4
  • 1.33e4
  • 1.33e4
  • 1.34e4
55.53
  • 55.53
  • 55.53
  • 54.97
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002538hatching gland
  • ZFS:0000026Segmentation:14-19 somites
1.39e4
  • 1.39e4
53.31
  • 53.31
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBC122239, BC152689, BX005435, CR352220
EnsemblENSDARG00000044092 (atpif1b)
Uniprot/SWISSPROTATF1B_DANRE, Q1LYB6
ZFINZDB-GENE-050506-113 (atpif1b)

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