D. rerio Gene: rab3gap2 - ENSDARG00000044136 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000044136
Namerab3gap2
DescriptionRAB3 GTPase activating protein subunit 2 (non-catalytic) [Source:ZFIN;Acc:ZDB-GENE-030616-610]
OrganismDanio rerio (zebrafish)
Synonym(s)rab3, rab3gap, si:ch211-214p16.5, si:zc214p16.5, wu:fb94b08, zgc:158161

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
3.04e3
  • 3.04e3
  • 3.17e3
  • 3.90e3
  • 5.02e3
  • 5.06e3
89.83
  • 89.83
  • 89.37
  • 86.94
  • 83.18
  • 83.04
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
3.76e3
  • 3.76e3
  • 3.90e3
  • 7.61e3
  • 8.86e3
  • 9.05e3
  • 9.19e3
87.40
  • 87.40
  • 86.94
  • 74.53
  • 70.32
  • 69.68
  • 69.22
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
3.88e3
  • 3.88e3
  • 4.53e3
  • 8.34e3
  • 8.72e3
87.00
  • 87.00
  • 84.84
  • 72.08
  • 70.79
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
4.07e3
  • 4.07e3
86.37
  • 86.37
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
4.31e3
  • 4.31e3
85.58
  • 85.58
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
4.64e3
  • 4.64e3
  • 6.70e3
  • 6.76e3
  • 6.77e3
  • 8.29e3
  • 8.51e3
  • 9.27e3
  • 9.36e3
  • 9.38e3
  • 9.84e3
84.48
  • 84.48
  • 77.55
  • 77.38
  • 77.35
  • 72.23
  • 71.51
  • 68.98
  • 68.65
  • 68.59
  • 67.04
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
4.74e3
  • 4.74e3
84.13
  • 84.13
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000106zygote stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
4.83e3
  • 4.83e3
  • 5.71e3
  • 8.27e3
  • 8.38e3
  • 8.83e3
  • 8.84e3
  • 9.04e3
  • 9.06e3
  • 9.09e3
  • 9.14e3
  • 9.35e3
  • 9.43e3
  • 9.65e3
  • 9.92e3
  • 1.47e4
  • 1.47e4
  • 1.49e4
83.84
  • 83.84
  • 80.88
  • 72.30
  • 71.95
  • 70.43
  • 70.39
  • 69.73
  • 69.66
  • 69.56
  • 69.39
  • 68.70
  • 68.44
  • 67.70
  • 66.79
  • 50.90
  • 50.68
  • 50.20
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
5.58e3
  • 5.58e3
81.32
  • 81.32
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.75e3
  • 5.75e3
80.74
  • 80.74
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
5.85e3
  • 5.85e3
80.40
  • 80.40
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
5.98e3
  • 5.98e3
80.00
  • 80.00
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
6.18e3
  • 6.18e3
79.31
  • 79.31
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
6.64e3
  • 6.64e3
77.76
  • 77.76
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
6.79e3
  • 6.79e3
77.28
  • 77.28
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
6.86e3
  • 6.86e3
77.05
  • 77.05
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
6.86e3
  • 6.86e3
77.02
  • 77.02
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
7.00e3
  • 7.00e3
76.56
  • 76.56
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
7.03e3
  • 7.03e3
  • 7.89e3
76.45
  • 76.45
  • 73.60
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
7.09e3
  • 7.09e3
  • 1.06e4
76.26
  • 76.26
  • 64.53
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
7.29e3
  • 7.29e3
75.61
  • 75.61
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
7.52e3
  • 7.52e3
74.84
  • 74.84
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
8.36e3
  • 8.36e3
  • 8.55e3
72.01
  • 72.01
  • 71.38
AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
8.47e3
  • 8.47e3
71.65
  • 71.65
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
8.70e3
  • 8.70e3
70.87
  • 70.87
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
8.79e3
  • 8.79e3
70.58
  • 70.58
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
8.80e3
  • 8.80e3
  • 8.86e3
  • 9.39e3
70.54
  • 70.54
  • 70.34
  • 68.56
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
9.03e3
  • 9.03e3
69.78
  • 69.78
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
62.75
  • 62.75
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
57.02
  • 57.02
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

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