D. rerio Gene: rbms2a - ENSDARG00000044179 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000044179
Namerbms2a
DescriptionRNA binding motif, single stranded interacting protein 2a [Source:ZFIN;Acc:ZDB-GENE-030912-2]
OrganismDanio rerio (zebrafish)
Synonym(s)rbms2

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
4.13e3
  • 4.13e3
86.19
  • 86.19
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
4.25e3
  • 4.25e3
  • 5.51e3
85.78
  • 85.78
  • 81.56
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
4.71e3
  • 4.71e3
84.23
  • 84.23
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
5.93e3
  • 5.93e3
  • 1.30e4
80.14
  • 80.14
  • 56.64
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
6.13e3
  • 6.13e3
79.48
  • 79.48
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
6.19e3
  • 6.19e3
  • 6.86e3
79.27
  • 79.27
  • 77.02
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
6.42e3
  • 6.42e3
78.52
  • 78.52
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
6.80e3
  • 6.80e3
77.22
  • 77.22
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
7.79e3
  • 7.79e3
73.93
  • 73.93
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.43e3
  • 8.43e3
71.77
  • 71.77
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
8.50e3
  • 8.50e3
  • 1.03e4
71.54
  • 71.54
  • 65.43
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
8.81e3
  • 8.81e3
  • 9.29e3
  • 1.11e4
  • 1.14e4
  • 1.20e4
70.51
  • 70.51
  • 68.88
  • 62.70
  • 61.73
  • 59.74
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
8.93e3
  • 8.93e3
70.08
  • 70.08
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
9.51e3
  • 9.51e3
68.14
  • 68.14
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
9.64e3
  • 9.64e3
67.74
  • 67.74
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.03e4
  • 1.03e4
65.35
  • 65.35
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.07
  • 64.07
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.08e4
  • 1.08e4
  • 1.31e4
63.93
  • 63.93
  • 56.12
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
62.58
  • 62.58
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.15e4
  • 1.15e4
61.56
  • 61.56
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
61.20
  • 61.20
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
60.84
  • 60.84
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.36e4
  • 1.36e4
54.38
  • 54.38
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.43e4
  • 1.43e4
52.03
  • 52.03
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSDARG00000044179 (rbms2a)
ZFINZDB-GENE-030912-2 (rbms2a)
EMBLCABZ01070045, CABZ01070046, CABZ01070047, CABZ01070048, CR762474
Uniprot/SPTREMBLE7F112, E7F112_DANRE

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