D. rerio Gene: si:ch211-243g18.2 - ENSDARG00000044261 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000044261
Namesi:ch211-243g18.2
Descriptionsi:ch211-243g18.2 [Source:ZFIN;Acc:ZDB-GENE-030131-2830]
OrganismDanio rerio (zebrafish)
Synonym(s)fc18h11, krtt1c10, wu:fc18h11
Orthologs(s)1 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
426
  • 426
  • 1.28e4
98.58
  • 98.58
  • 57.00
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
1.76e3
  • 1.76e3
  • 2.29e3
  • 2.78e3
  • 3.20e3
  • 3.30e3
  • 3.38e3
  • 7.02e3
  • 7.35e3
  • 1.20e4
  • 1.75e4
94.12
  • 94.12
  • 92.32
  • 90.69
  • 89.30
  • 88.95
  • 88.69
  • 76.50
  • 75.39
  • 59.70
  • 41.29
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
2.68e3
  • 2.68e3
  • 3.82e3
  • 4.55e3
91.03
  • 91.03
  • 87.21
  • 84.76
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
3.32e3
  • 3.32e3
  • 2.18e4
88.90
  • 88.90
  • 26.91
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000036Larval:Day 4
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000037Larval:Day 5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
4.46e3
  • 4.46e3
  • 4.66e3
  • 6.06e3
  • 6.56e3
  • 1.06e4
  • 1.07e4
  • 1.34e4
  • 1.53e4
  • 1.77e4
  • 1.78e4
85.05
  • 85.05
  • 84.40
  • 79.71
  • 78.04
  • 64.41
  • 64.29
  • 55.08
  • 48.69
  • 40.62
  • 40.56
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.39e3
  • 6.39e3
78.62
  • 78.62
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
6.78e3
  • 6.78e3
  • 9.23e3
77.31
  • 77.31
  • 69.11
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
7.30e3
  • 7.30e3
75.55
  • 75.55
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.03e4
  • 1.03e4
65.61
  • 65.61
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.65
  • 64.65
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.19
  • 63.19
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.11
  • 60.11
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
1.29e4
  • 1.29e4
56.87
  • 56.87
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.39e4
  • 1.39e4
53.59
  • 53.59
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.52e4
  • 1.52e4
49.02
  • 49.02
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.60e4
  • 1.60e4
46.40
  • 46.40
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.60e4
  • 1.60e4
46.28
  • 46.28
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.64e4
  • 1.64e4
45.14
  • 45.14
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.65e4
  • 1.65e4
44.83
  • 44.83
AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000022Gastrula:Bud
1.75e4
  • 1.75e4
  • 1.76e4
41.42
  • 41.42
  • 41.10
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
2.01e4
  • 2.01e4
32.76
  • 32.76
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi1 species1 geneCompare expression

Orthology information comes from OMA : ENSDARG00000044261.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Euteleostomi1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000044261.

Cross-references

EnsemblENSDARG00000044261 (si:ch211-243g18.2)
ZFINZDB-GENE-030131-2830 (si:ch211-243g18.2)
EMBLBC162170, BC162525, BX248511
Uniprot/SPTREMBLQ1LXV4, Q1LXV4_DANRE, Q1LXV5, Q1LXV5_DANRE

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