D. rerio Gene: synpr - ENSDARG00000044278 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000044278
Namesynpr
Descriptionsynaptoporin [Source:ZFIN;Acc:ZDB-GENE-030616-625]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch211-263a23.1, si:zc263a23.1, wu:fq14d10

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
8.41e3
  • 8.41e3
  • 1.52e4
71.84
  • 71.84
  • 48.95
AEIR
  • AEIR
  • AEIR
UBERON:0001890forebrain
  • ZFS:0000037Larval:Day 5
8.96e3
  • 8.96e3
70.00
  • 70.00
AEIR
  • AEIR
UBERON:0001905pineal body
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000031Pharyngula:Prim-25
9.44e3
  • 9.44e3
  • 1.07e4
  • 1.08e4
68.40
  • 68.40
  • 64.28
  • 63.87
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • ZFS:0000031Pharyngula:Prim-25
1.09e4
  • 1.09e4
  • 1.45e4
  • 1.80e4
63.55
  • 63.55
  • 51.33
  • 39.71
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
1.35e4
  • 1.35e4
  • 1.77e4
  • 1.77e4
54.94
  • 54.94
  • 40.74
  • 40.67
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
1.43e4
  • 1.43e4
  • 1.99e4
52.17
  • 52.17
  • 33.45
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.71e4
  • 1.71e4
42.61
  • 42.61
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.88e4
  • 1.88e4
37.17
  • 37.17
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLAL732567, BC086853, BC164641
EnsemblENSDARG00000044278 (synpr)
Uniprot/SPTREMBLQ801U9, Q801U9_DANRE
ZFINZDB-GENE-030616-625 (synpr)

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