D. rerio Gene: itgb7 - ENSDARG00000044318 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000044318
Nameitgb7
Descriptionintegrin, beta 7 [Source:ZFIN;Acc:ZDB-GENE-100728-2]
OrganismDanio rerio (zebrafish)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
5.75e3
  • 5.75e3
80.74
  • 80.74
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
6.46e3
  • 6.46e3
78.36
  • 78.36
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
6.54e3
  • 6.54e3
78.09
  • 78.09
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
9.02e3
  • 9.02e3
69.79
  • 69.79
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
9.88e3
  • 9.88e3
66.90
  • 66.90
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.42
  • 64.42
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.30
  • 62.30
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.04
  • 62.04
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
57.92
  • 57.92
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
57.87
  • 57.87
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.43e4
  • 1.43e4
52.04
  • 52.04
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.52e4
  • 1.52e4
49.12
  • 49.12
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.54e4
  • 1.54e4
48.41
  • 48.41
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.56e4
  • 1.56e4
47.80
  • 47.80
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.58e4
  • 1.58e4
47.16
  • 47.16
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.68e4
  • 1.68e4
43.79
  • 43.79
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.82e4
  • 1.82e4
39.05
  • 39.05
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
1.99e4
  • 1.99e4
  • 2.00e4
  • 2.00e4
  • 2.22e4
33.39
  • 33.39
  • 32.93
  • 32.88
  • 25.78
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
2.13e4
  • 2.13e4
  • 2.13e4
28.67
  • 28.67
  • 28.65
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAL954698
EnsemblENSDARG00000044318 (itgb7)
Uniprot/SPTREMBLE7F4H9, E7F4H9_DANRE
ZFINZDB-GENE-100728-2 (itgb7)

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