D. rerio Gene: rbmx2 - ENSDARG00000044380 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000044380
Namerbmx2
DescriptionRNA binding motif protein, X-linked 2 [Source:ZFIN;Acc:ZDB-GENE-050626-88]
OrganismDanio rerio (zebrafish)
Synonym(s)im:7141316, zgc:113884

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.70e3
  • 1.70e3
94.31
  • 94.31
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
2.72e3
  • 2.72e3
  • 4.05e3
90.89
  • 90.89
  • 86.45
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.96e3
  • 2.96e3
90.08
  • 90.08
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
3.16e3
  • 3.16e3
  • 3.21e3
89.43
  • 89.43
  • 89.25
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
3.36e3
  • 3.36e3
88.75
  • 88.75
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
5.48e3
  • 5.48e3
  • 6.29e3
  • 8.28e3
  • 8.90e3
  • 1.07e4
81.66
  • 81.66
  • 78.93
  • 72.27
  • 70.19
  • 64.33
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
5.59e3
  • 5.59e3
  • 8.57e3
81.27
  • 81.27
  • 71.32
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
5.79e3
  • 5.79e3
80.61
  • 80.61
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
5.92e3
  • 5.92e3
  • 1.05e4
80.20
  • 80.20
  • 64.82
AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • UBERON:0000106zygote stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000015Blastula:Dome
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000026Segmentation:14-19 somites
6.40e3
  • 6.40e3
  • 6.40e3
  • 6.40e3
  • 6.64e3
  • 6.89e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.97e3
  • 8.53e3
  • 8.54e3
  • 8.71e3
  • 8.79e3
  • 8.79e3
  • 8.96e3
  • 8.96e3
  • 9.13e3
  • 9.13e3
  • 9.13e3
  • 9.71e3
  • 9.96e3
  • 9.96e3
78.57
  • 78.57
  • 78.57
  • 78.57
  • 77.77
  • 76.92
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 73.32
  • 71.43
  • 71.41
  • 70.82
  • 70.57
  • 70.57
  • 69.99
  • 69.98
  • 69.43
  • 69.43
  • 69.43
  • 67.48
  • 66.66
  • 66.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
6.69e3
  • 6.69e3
77.59
  • 77.59
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
6.89e3
  • 6.89e3
  • 1.51e4
76.92
  • 76.92
  • 49.60
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
7.25e3
  • 7.25e3
75.73
  • 75.73
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
7.52e3
  • 7.52e3
74.81
  • 74.81
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
7.95e3
  • 7.95e3
73.39
  • 73.39
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
8.03e3
  • 8.03e3
73.10
  • 73.10
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
8.19e3
  • 8.19e3
72.59
  • 72.59
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
8.41e3
  • 8.41e3
71.85
  • 71.85
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
8.52e3
  • 8.52e3
71.46
  • 71.46
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
9.22e3
  • 9.22e3
69.12
  • 69.12
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
9.37e3
  • 9.37e3
68.64
  • 68.64
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
9.66e3
  • 9.66e3
67.65
  • 67.65
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
65.83
  • 65.83
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
57.89
  • 57.89
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.36e4
  • 1.36e4
  • 1.50e4
54.41
  • 54.41
  • 49.93
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.59e4
  • 1.59e4
46.90
  • 46.90
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EnsemblENSDARG00000044380 (rbmx2)
ZFINZDB-GENE-050626-88 (rbmx2)
EMBLAL935199
Uniprot/SPTREMBLF1RAH8, F1RAH8_DANRE, F1RDI9, F1RDI9_DANRE

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