D. rerio Gene: viml - ENSDARG00000044501 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000044501
Nameviml
Descriptionvimentin like [Source:ZFIN;Acc:ZDB-GENE-040426-1743]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:73275
Orthologs(s)18 orthologs
Paralog(s)8 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
5.83e3
  • 5.83e3
80.48
  • 80.48
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
6.94e3
  • 6.94e3
76.76
  • 76.76
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
8.19e3
  • 8.19e3
72.59
  • 72.59
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
8.54e3
  • 8.54e3
71.39
  • 71.39
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.12e4
  • 1.12e4
  • 1.90e4
62.45
  • 62.45
  • 36.28
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.35e4
  • 1.35e4
54.81
  • 54.81
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.37e4
  • 1.37e4
54.02
  • 54.02
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.41e4
  • 1.41e4
52.74
  • 52.74
AEIR
  • AEIR
UBERON:0000080mesonephros
  • UBERON:0000066fully formed stage
1.44e4
  • 1.44e4
51.94
  • 51.94
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.45e4
  • 1.45e4
51.48
  • 51.48
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.48e4
  • 1.48e4
50.53
  • 50.53
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.93
  • 49.93
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
1.50e4
  • 1.50e4
  • 1.50e4
  • 1.78e4
  • 1.79e4
  • 1.81e4
  • 1.83e4
  • 1.83e4
49.92
  • 49.92
  • 49.81
  • 40.56
  • 40.18
  • 39.42
  • 38.62
  • 38.57
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.51e4
  • 1.51e4
49.54
  • 49.54
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
1.57e4
  • 1.57e4
  • 1.71e4
  • 1.79e4
47.32
  • 47.32
  • 42.86
  • 39.98
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.60e4
  • 1.60e4
46.26
  • 46.26
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.61e4
  • 1.61e4
46.05
  • 46.05
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
1.65e4
  • 1.65e4
  • 1.75e4
44.86
  • 44.86
  • 41.42
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.76e4
  • 1.76e4
41.01
  • 41.01
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.80e4
  • 1.80e4
39.81
  • 39.81
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
1.82e4
  • 1.82e4
39.06
  • 39.06
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
1.88e4
  • 1.88e4
  • 2.08e4
  • 2.18e4
  • 2.24e4
  • 2.24e4
37.16
  • 37.16
  • 30.26
  • 27.02
  • 24.98
  • 24.89
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Paralogs (same species)

Paralogy information comes from OMA : ENSDARG00000044501.

Cross-references

EnsemblENSDARG00000044501 (viml)
ZFINZDB-GENE-040426-1743 (viml)
EMBLCU571088
Uniprot/SPTREMBLF1QT60, F1QT60_DANRE

Do not show this banner again