D. rerio Gene: zgc:112416 - ENSDARG00000044549 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000044549
Namezgc:112416
Descriptionzgc:112416 [Source:ZFIN;Acc:ZDB-GENE-050417-347]
OrganismDanio rerio (zebrafish)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
60.51
  • 60.51
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0004707pharyngula stage
1.22e4
  • 1.22e4
59.08
  • 59.08
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.25e4
  • 1.25e4
58.20
  • 58.20
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.40e4
  • 1.40e4
53.20
  • 53.20
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.66e4
  • 1.66e4
44.36
  • 44.36
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.74e4
  • 1.74e4
41.75
  • 41.75
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.82
  • 40.82
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.00e4
  • 2.00e4
33.20
  • 33.20
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.10e4
  • 2.10e4
29.81
  • 29.81
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
2.12e4
  • 2.12e4
28.94
  • 28.94
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
2.21e4
  • 2.21e4
  • 2.25e4
  • 2.30e4
  • 2.35e4
25.88
  • 25.88
  • 24.64
  • 23.09
  • 21.38
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.23e4
  • 2.23e4
25.21
  • 25.21
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.48e4
  • 2.48e4
16.90
  • 16.90
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EMBLBX640508, BX936453
EnsemblENSDARG00000044549 (zgc:112416)
Uniprot/SPTREMBLI3ISM1, I3ISM1_DANRE
ZFINZDB-GENE-050417-347 (zgc:112416)

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