D. rerio Gene: cycsb - ENSDARG00000044562 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000044562
Namecycsb
Descriptioncytochrome c, somatic b [Source:ZFIN;Acc:ZDB-GENE-040625-38]
OrganismDanio rerio (zebrafish)
Synonym(s)cyc, fk52b01, wu:fk52b01, zgc:86706

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
171
  • 171
99.43
  • 99.43
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
231
  • 231
  • 357
  • 1.15e4
99.23
  • 99.23
  • 98.81
  • 61.51
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
234
  • 234
99.22
  • 99.22
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000025Segmentation:10-13 somites
  • UBERON:0000068embryo stage
238
  • 238
  • 326
  • 334
  • 414
  • 436
  • 440
  • 466
  • 473
  • 522
  • 607
99.21
  • 99.21
  • 98.91
  • 98.89
  • 98.62
  • 98.54
  • 98.53
  • 98.44
  • 98.42
  • 98.26
  • 97.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000104life cycle
293
  • 293
  • 456
  • 1.37e4
99.02
  • 99.02
  • 98.48
  • 54.11
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
309
  • 309
98.97
  • 98.97
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
319
  • 319
  • 837
98.94
  • 98.94
  • 97.20
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
334
  • 334
98.88
  • 98.88
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
375
  • 375
  • 498
  • 553
98.75
  • 98.75
  • 98.34
  • 98.15
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
378
  • 378
98.74
  • 98.74
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000036Larval:Day 4
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000106zygote stage
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000068embryo stage
  • ZFS:0000049segmentation
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
385
  • 385
  • 387
  • 448
  • 453
  • 454
  • 463
  • 466
  • 468
  • 475
  • 492
  • 494
  • 573
  • 646
  • 834
  • 1.08e4
  • 1.33e4
  • 1.45e4
  • 1.47e4
  • 1.47e4
98.71
  • 98.71
  • 98.71
  • 98.50
  • 98.49
  • 98.48
  • 98.45
  • 98.44
  • 98.44
  • 98.41
  • 98.36
  • 98.35
  • 98.09
  • 97.84
  • 97.21
  • 63.88
  • 55.46
  • 51.51
  • 50.90
  • 50.68
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
386
  • 386
98.71
  • 98.71
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
399
  • 399
  • 473
  • 550
  • 1.87e3
98.67
  • 98.67
  • 98.42
  • 98.16
  • 93.73
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
400
  • 400
98.66
  • 98.66
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
409
  • 409
98.63
  • 98.63
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
419
  • 419
  • 616
98.60
  • 98.60
  • 97.94
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
423
  • 423
  • 474
  • 556
  • 573
  • 586
  • 688
98.59
  • 98.59
  • 98.41
  • 98.14
  • 98.08
  • 98.04
  • 97.70
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
445
  • 445
98.51
  • 98.51
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
455
  • 455
98.48
  • 98.48
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
481
  • 481
98.39
  • 98.39
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
611
  • 611
97.96
  • 97.96
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
625
  • 625
97.91
  • 97.91
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
626
  • 626
97.91
  • 97.91
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
653
  • 653
97.82
  • 97.82
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
680
  • 680
97.73
  • 97.73
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
706
  • 706
  • 897
  • 1.04e3
  • 1.05e3
  • 1.11e3
97.64
  • 97.64
  • 97.00
  • 96.53
  • 96.49
  • 96.27
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
724
  • 724
97.58
  • 97.58
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.01e3
  • 1.01e3
  • 1.47e4
96.61
  • 96.61
  • 50.88
AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.03e3
  • 1.03e3
96.56
  • 96.56
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.04e3
  • 1.04e3
96.53
  • 96.53
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.62e3
  • 1.62e3
94.58
  • 94.58
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.01e3
  • 2.01e3
93.28
  • 93.28
AEIR
  • AEIR
UBERON:0011150pharyngeal arch derived gill
  • UBERON:0000066fully formed stage
9.34e3
  • 9.34e3
68.74
  • 68.74
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
  • 1.46e4
60.44
  • 60.44
  • 51.26
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLBC071383
EnsemblENSDARG00000044562 (cycsb)
Uniprot/SWISSPROTCYC_DANRE, Q6IQM2
ZFINZDB-GENE-040625-38 (cycsb)

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