D. rerio Gene: cldn19 - ENSDARG00000044569 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000044569
Namecldn19
Descriptionclaudin 19 [Source:ZFIN;Acc:ZDB-GENE-050417-242]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:112141
Orthologs(s)18 orthologs
Paralog(s)11 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
1.70e3
  • 1.70e3
  • 1.28e4
94.30
  • 94.30
  • 57.20
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
2.00e3
  • 2.00e3
93.30
  • 93.30
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
3.16e3
  • 3.16e3
89.43
  • 89.43
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
3.51e3
  • 3.51e3
88.25
  • 88.25
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
3.52e3
  • 3.52e3
  • 4.47e3
  • 5.48e3
  • 8.98e3
  • 9.20e3
  • 1.03e4
  • 1.36e4
  • 1.78e4
88.20
  • 88.20
  • 85.04
  • 81.64
  • 69.93
  • 69.20
  • 65.56
  • 54.32
  • 40.27
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
3.68e3
  • 3.68e3
  • 6.99e3
87.68
  • 87.68
  • 76.60
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
4.42e3
  • 4.42e3
  • 4.44e3
  • 4.64e3
85.19
  • 85.19
  • 85.15
  • 84.45
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
4.60e3
  • 4.60e3
  • 5.89e3
  • 5.95e3
  • 6.54e3
  • 1.08e4
  • 1.18e4
  • 1.70e4
  • 1.78e4
84.59
  • 84.59
  • 80.27
  • 80.08
  • 78.09
  • 63.86
  • 60.55
  • 43.18
  • 40.38
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
4.70e3
  • 4.70e3
84.26
  • 84.26
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
5.75e3
  • 5.75e3
  • 8.29e3
  • 1.48e4
80.75
  • 80.75
  • 72.25
  • 50.31
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
9.05e3
  • 9.05e3
  • 1.04e4
69.69
  • 69.69
  • 65.11
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.40e4
  • 1.40e4
53.22
  • 53.22
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.58e4
  • 1.58e4
46.98
  • 46.98
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.69e4
  • 1.69e4
  • 1.75e4
43.39
  • 43.39
  • 41.25
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata11 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000044569.

Cross-references

EnsemblENSDARG00000044569 (cldn19)
ZFINZDB-GENE-050417-242 (cldn19)
EMBLBC093218, CU633817, FP102156
Uniprot/SPTREMBLQ567D5, Q567D5_DANRE

Do not show this banner again