D. rerio Gene: ccdc90b - ENSDARG00000044626 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000044626
Nameccdc90b
Descriptioncoiled-coil domain containing 90B [Source:ZFIN;Acc:ZDB-GENE-040724-162]
OrganismDanio rerio (zebrafish)
Synonym(s)bz1p14.3, si:rp71-1p14.3
Orthologs(s)18 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
3.89e3
  • 3.89e3
86.98
  • 86.98
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
5.06e3
  • 5.06e3
  • 9.05e3
83.05
  • 83.05
  • 69.71
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
5.55e3
  • 5.55e3
  • 6.82e3
81.43
  • 81.43
  • 77.15
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
5.75e3
  • 5.75e3
80.74
  • 80.74
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
5.97e3
  • 5.97e3
  • 7.31e3
80.01
  • 80.01
  • 75.52
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.33e3
  • 6.33e3
78.79
  • 78.79
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
6.93e3
  • 6.93e3
76.80
  • 76.80
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
7.17e3
  • 7.17e3
75.99
  • 75.99
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
7.38e3
  • 7.38e3
75.30
  • 75.30
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
7.45e3
  • 7.45e3
75.07
  • 75.07
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
7.66e3
  • 7.66e3
  • 8.65e3
  • 8.67e3
  • 9.52e3
  • 1.06e4
74.35
  • 74.35
  • 71.05
  • 70.98
  • 68.12
  • 64.58
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
7.88e3
  • 7.88e3
73.63
  • 73.63
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
8.19e3
  • 8.19e3
72.57
  • 72.57
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
8.36e3
  • 8.36e3
72.02
  • 72.02
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
8.52e3
  • 8.52e3
71.48
  • 71.48
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
9.03e3
  • 9.03e3
69.78
  • 69.78
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
9.22e3
  • 9.22e3
  • 1.13e4
69.13
  • 69.13
  • 62.08
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.31
  • 65.31
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.57
  • 64.57
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
  • 1.14e4
64.42
  • 64.42
  • 61.70
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.18
  • 60.18
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.03
  • 59.03
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.25e4
  • 1.25e4
  • 1.49e4
58.18
  • 58.18
  • 49.94
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Bilateria1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000044626.

Cross-references

EnsemblENSDARG00000044626 (ccdc90b)
ZFINZDB-GENE-040724-162 (ccdc90b)
EMBLCU928848
Uniprot/SPTREMBLF1QGC9, F1QGC9_DANRE

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