D. rerio Gene: rbp4l - ENSDARG00000044684 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000044684
Namerbp4l
Descriptionretinol binding protein 4, like [Source:ZFIN;Acc:ZDB-GENE-030131-7591]
OrganismDanio rerio (zebrafish)
Synonym(s)purpurin, wu:fk53a11, zgc:73163
Orthologs(s)5 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
76.0
  • 76.0
  • 439
  • 2.23e3
  • 9.48e3
  • 1.34e4
99.75
  • 99.75
  • 98.53
  • 92.52
  • 68.25
  • 54.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
183
  • 183
  • 212
99.39
  • 99.39
  • 99.29
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
432
  • 432
  • 708
  • 1.22e3
  • 1.35e3
  • 2.81e3
  • 3.32e3
  • 4.99e3
  • 6.47e3
  • 6.69e3
  • 6.86e3
  • 6.97e3
  • 7.63e3
98.56
  • 98.56
  • 97.63
  • 95.91
  • 95.48
  • 90.58
  • 88.88
  • 83.29
  • 78.34
  • 77.61
  • 77.02
  • 76.68
  • 74.45
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0000068embryo stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000033Hatching:Long-pec
483
  • 483
  • 2.56e3
  • 2.86e3
  • 3.16e3
  • 5.37e3
  • 5.40e3
  • 6.78e3
  • 7.19e3
  • 7.89e3
  • 1.26e4
98.38
  • 98.38
  • 91.43
  • 90.43
  • 89.41
  • 82.02
  • 81.92
  • 77.31
  • 75.92
  • 73.57
  • 57.86
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
686
  • 686
  • 727
  • 2.14e3
97.71
  • 97.71
  • 97.57
  • 92.85
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
3.26e3
  • 3.26e3
  • 1.44e4
89.07
  • 89.07
  • 51.76
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
5.45e3
  • 5.45e3
81.74
  • 81.74
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000109gastrula stage
5.99e3
  • 5.99e3
  • 9.98e3
  • 1.05e4
  • 1.45e4
79.95
  • 79.95
  • 66.59
  • 64.94
  • 51.53
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
7.20e3
  • 7.20e3
75.90
  • 75.90
AEIR
  • AEIR
UBERON:0001787photoreceptor layer of retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
7.47e3
  • 7.47e3
  • 1.19e4
  • 1.31e4
75.00
  • 75.00
  • 59.99
  • 56.24
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2000088YSL
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
8.96e3
  • 8.96e3
  • 8.96e3
  • 8.96e3
  • 1.20e4
  • 1.23e4
  • 1.23e4
  • 1.31e4
  • 1.32e4
  • 1.32e4
69.99
  • 69.99
  • 69.99
  • 69.99
  • 59.98
  • 58.80
  • 58.80
  • 56.23
  • 55.86
  • 55.86
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001905pineal body
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
9.33e3
  • 9.33e3
  • 1.26e4
  • 1.35e4
  • 1.39e4
  • 1.39e4
  • 1.40e4
  • 1.40e4
  • 1.41e4
68.74
  • 68.74
  • 57.87
  • 54.73
  • 53.31
  • 53.31
  • 53.10
  • 53.10
  • 52.75
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001789outer nuclear layer of retina
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
1.28e4
  • 1.28e4
  • 1.49e4
57.14
  • 57.14
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0010170region of neural crest
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
1.49e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
49.99
  • 49.99
  • 49.98
  • 49.98
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.77
  • 40.77
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.45e4
  • 2.45e4
17.99
  • 17.99
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Cross-references

Do not show this banner again