D. rerio Gene: nr0b2a - ENSDARG00000044685 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000044685
Namenr0b2a
Descriptionnuclear receptor subfamily 0, group B, member 2a [Source:ZFIN;Acc:ZDB-GENE-080403-1]
OrganismDanio rerio (zebrafish)
Synonym(s)gb:bc058069, nr0b2, nr0b2-a, shp-a

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004734gastrula
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
274
  • 274
  • 471
  • 502
  • 849
  • 936
  • 4.35e3
99.09
  • 99.09
  • 98.43
  • 98.32
  • 97.16
  • 96.87
  • 85.43
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
481
  • 481
  • 1.09e3
  • 2.35e3
  • 3.56e3
  • 3.89e3
  • 3.96e3
  • 4.58e3
  • 6.37e3
  • 6.78e3
  • 7.82e3
  • 8.91e3
  • 9.62e3
  • 9.80e3
  • 9.96e3
  • 1.03e4
  • 1.43e4
  • 1.47e4
  • 1.50e4
98.39
  • 98.39
  • 96.36
  • 92.14
  • 88.10
  • 86.96
  • 86.74
  • 84.67
  • 78.68
  • 77.30
  • 73.83
  • 70.17
  • 67.79
  • 67.19
  • 66.66
  • 65.65
  • 51.99
  • 50.90
  • 49.80
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
985
  • 985
96.70
  • 96.70
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0004707pharyngula stage
  • ZFS:0000025Segmentation:10-13 somites
  • UBERON:0000068embryo stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
2.41e3
  • 2.41e3
  • 3.45e3
  • 3.66e3
  • 4.36e3
  • 6.36e3
  • 6.62e3
  • 7.43e3
  • 7.99e3
  • 1.28e4
  • 1.48e4
91.92
  • 91.92
  • 88.46
  • 87.76
  • 85.40
  • 78.72
  • 77.84
  • 75.13
  • 73.24
  • 57.09
  • 50.58
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
3.97e3
  • 3.97e3
  • 7.41e3
86.71
  • 86.71
  • 75.18
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
7.76e3
  • 7.76e3
  • 8.06e3
  • 9.61e3
74.02
  • 74.02
  • 73.01
  • 67.83
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
8.43e3
  • 8.43e3
71.79
  • 71.79
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
8.99e3
  • 8.99e3
69.90
  • 69.90
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
9.51e3
  • 9.51e3
68.14
  • 68.14
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.02e4
  • 1.02e4
65.96
  • 65.96
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.04e4
  • 1.04e4
65.18
  • 65.18
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.05e4
  • 1.05e4
64.97
  • 64.97
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
62.75
  • 62.75
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
60.81
  • 60.81
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.39e4
  • 1.39e4
  • 1.44e4
53.32
  • 53.32
  • 51.82
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.66e4
  • 1.66e4
44.54
  • 44.54
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
1.67e4
  • 1.67e4
44.01
  • 44.01
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.77
  • 40.77
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.86e4
  • 1.86e4
37.81
  • 37.81
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.03e4
  • 2.03e4
32.06
  • 32.06
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.15e4
  • 2.15e4
27.86
  • 27.86
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLCU104704
EnsemblENSDARG00000044685 (nr0b2a)
Uniprot/SPTREMBLF8W3I2, F8W3I2_DANRE
ZFINZDB-GENE-080403-1 (nr0b2a)

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