D. rerio Gene: vav2 - ENSDARG00000044718 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000044718
Namevav2
Descriptionvav 2 guanine nucleotide exchange factor [Source:ZFIN;Acc:ZDB-GENE-091204-420]
OrganismDanio rerio (zebrafish)
Synonym(s)si:dkeyp-116h7.3
Orthologs(s)25 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
2.57e3
  • 2.57e3
  • 6.36e3
  • 7.90e3
  • 8.64e3
  • 9.47e3
  • 1.03e4
  • 1.04e4
  • 1.08e4
  • 1.08e4
  • 1.08e4
  • 1.09e4
  • 1.10e4
  • 1.14e4
  • 1.20e4
91.38
  • 91.38
  • 78.70
  • 73.53
  • 71.08
  • 68.28
  • 65.57
  • 65.16
  • 63.77
  • 63.69
  • 63.68
  • 63.40
  • 63.15
  • 61.80
  • 59.78
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
5.10e3
  • 5.10e3
82.93
  • 82.93
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
5.87e3
  • 5.87e3
80.35
  • 80.35
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
6.05e3
  • 6.05e3
  • 6.19e3
  • 9.04e3
  • 1.08e4
  • 1.11e4
79.75
  • 79.75
  • 79.26
  • 69.74
  • 63.94
  • 62.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
6.59e3
  • 6.59e3
  • 1.03e4
  • 1.05e4
  • 1.11e4
77.95
  • 77.95
  • 65.57
  • 64.85
  • 62.81
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
6.92e3
  • 6.92e3
76.83
  • 76.83
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
7.35e3
  • 7.35e3
75.40
  • 75.40
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
7.95e3
  • 7.95e3
73.37
  • 73.37
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
8.00e3
  • 8.00e3
73.21
  • 73.21
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
8.13e3
  • 8.13e3
  • 1.01e4
72.77
  • 72.77
  • 66.10
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
8.21e3
  • 8.21e3
  • 9.93e3
  • 1.13e4
72.51
  • 72.51
  • 66.76
  • 62.15
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
8.25e3
  • 8.25e3
72.38
  • 72.38
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
8.34e3
  • 8.34e3
  • 1.14e4
  • 1.16e4
  • 1.16e4
  • 1.16e4
  • 1.17e4
  • 1.23e4
  • 1.24e4
  • 1.26e4
  • 1.29e4
72.09
  • 72.09
  • 61.83
  • 61.26
  • 61.20
  • 61.03
  • 60.96
  • 58.77
  • 58.47
  • 57.68
  • 56.69
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
8.36e3
  • 8.36e3
  • 1.17e4
72.01
  • 72.01
  • 60.73
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
8.38e3
  • 8.38e3
71.94
  • 71.94
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
8.76e3
  • 8.76e3
  • 9.69e3
70.66
  • 70.66
  • 67.56
AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
8.90e3
  • 8.90e3
70.21
  • 70.21
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
9.59e3
  • 9.59e3
67.88
  • 67.88
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
9.74e3
  • 9.74e3
67.38
  • 67.38
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.12
  • 65.12
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.07
  • 65.07
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.07
  • 65.07
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
1.08e4
  • 1.08e4
  • 1.12e4
  • 1.15e4
  • 1.19e4
  • 1.23e4
  • 1.40e4
63.93
  • 63.93
  • 62.48
  • 61.57
  • 60.32
  • 58.95
  • 53.26
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
63.82
  • 63.82
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.09e4
  • 1.09e4
63.55
  • 63.55
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.11e4
  • 1.11e4
62.92
  • 62.92
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
60.96
  • 60.96
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
60.60
  • 60.60
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
57.07
  • 57.07
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.30e4
  • 1.30e4
56.42
  • 56.42
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.32e4
  • 1.32e4
55.76
  • 55.76
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.41e4
  • 1.41e4
52.76
  • 52.76
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi18 species18 genesCompare expression
Bilateria25 species25 genesCompare expression

Orthology information comes from OMA : ENSDARG00000044718.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Chordata2 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000044718.

Cross-references

EnsemblENSDARG00000044718 (vav2)
ZFINZDB-GENE-091204-420 (vav2)
Uniprot/SPTREMBLF1QE02, F1QE02_DANRE, F1QUI8, F1QUI8_DANRE

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