D. rerio Gene: TTC17 - ENSDARG00000044812 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000044812
NameTTC17
DescriptionTetratricopeptide repeat protein 17 [Source:UniProtKB/Swiss-Prot;Acc:E7F211]
OrganismDanio rerio (zebrafish)
Synonym(s)flj10890

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
4.96e3
  • 4.96e3
83.39
  • 83.39
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
5.92e3
  • 5.92e3
  • 7.98e3
  • 8.78e3
  • 8.90e3
  • 9.19e3
80.18
  • 80.18
  • 73.29
  • 70.61
  • 70.21
  • 69.25
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
6.06e3
  • 6.06e3
79.71
  • 79.71
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
6.36e3
  • 6.36e3
78.72
  • 78.72
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
6.67e3
  • 6.67e3
77.68
  • 77.68
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000042Juvenile:Days 30-44
6.97e3
  • 6.97e3
  • 8.50e3
  • 9.86e3
  • 1.00e4
  • 1.00e4
  • 1.04e4
  • 1.04e4
  • 1.15e4
  • 1.17e4
  • 1.18e4
  • 1.23e4
  • 1.23e4
  • 1.24e4
  • 1.30e4
76.66
  • 76.66
  • 71.53
  • 66.99
  • 66.52
  • 66.44
  • 65.33
  • 65.03
  • 61.39
  • 60.77
  • 60.65
  • 58.95
  • 58.81
  • 58.52
  • 56.63
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
7.41e3
  • 7.41e3
75.21
  • 75.21
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
7.79e3
  • 7.79e3
73.91
  • 73.91
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
7.93e3
  • 7.93e3
73.46
  • 73.46
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
8.39e3
  • 8.39e3
71.92
  • 71.92
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
8.47e3
  • 8.47e3
71.63
  • 71.63
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
8.75e3
  • 8.75e3
70.70
  • 70.70
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
9.08e3
  • 9.08e3
69.61
  • 69.61
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
9.15e3
  • 9.15e3
  • 9.38e3
  • 9.51e3
  • 9.57e3
  • 1.04e4
  • 1.06e4
69.35
  • 69.35
  • 68.58
  • 68.15
  • 67.97
  • 65.20
  • 64.53
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
9.17e3
  • 9.17e3
69.28
  • 69.28
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
9.21e3
  • 9.21e3
69.15
  • 69.15
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
9.36e3
  • 9.36e3
  • 1.54e4
68.64
  • 68.64
  • 48.40
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
9.46e3
  • 9.46e3
  • 1.43e4
68.32
  • 68.32
  • 52.13
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
9.52e3
  • 9.52e3
68.11
  • 68.11
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
9.65e3
  • 9.65e3
67.69
  • 67.69
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
9.66e3
  • 9.66e3
67.66
  • 67.66
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
9.80e3
  • 9.80e3
  • 1.10e4
67.20
  • 67.20
  • 63.26
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
1.00e4
  • 1.00e4
  • 1.07e4
  • 1.11e4
  • 1.13e4
  • 1.14e4
  • 1.23e4
  • 1.24e4
  • 1.28e4
  • 1.56e4
66.42
  • 66.42
  • 64.20
  • 62.97
  • 62.08
  • 61.83
  • 58.88
  • 58.45
  • 57.24
  • 47.79
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
65.79
  • 65.79
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
65.38
  • 65.38
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.16
  • 64.16
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
62.52
  • 62.52
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.16e4
  • 1.16e4
61.29
  • 61.29
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.36e4
  • 1.36e4
  • 1.38e4
  • 1.45e4
54.55
  • 54.55
  • 53.84
  • 51.51
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.65e4
  • 1.65e4
44.73
  • 44.73
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLCR376774
EnsemblENSDARG00000044812 (TTC17)
HGNCHGNC:25596 (TTC17)
Uniprot/SWISSPROTE7F211, TTC17_DANRE

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