D. rerio Gene: zgc:92107 - ENSDARG00000044874 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000044874
Namezgc:92107
Descriptionzgc:92107 [Source:ZFIN;Acc:ZDB-GENE-041114-4]
OrganismDanio rerio (zebrafish)
Synonym(s)wu:fa99h06, wu:fj78h03

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
564
  • 564
98.12
  • 98.12
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
688
  • 688
97.70
  • 97.70
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
740
  • 740
97.52
  • 97.52
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.22e3
  • 1.22e3
  • 2.81e3
95.93
  • 95.93
  • 90.58
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
1.25e3
  • 1.25e3
  • 2.07e3
  • 3.73e3
  • 5.25e3
95.82
  • 95.82
  • 93.08
  • 87.50
  • 82.41
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000068embryo stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
1.27e3
  • 1.27e3
  • 1.36e3
  • 1.81e3
  • 1.83e3
  • 2.20e3
  • 2.90e3
  • 3.32e3
  • 3.34e3
  • 3.87e3
  • 7.86e3
95.76
  • 95.76
  • 95.46
  • 93.94
  • 93.86
  • 92.64
  • 90.31
  • 88.89
  • 88.83
  • 87.06
  • 73.67
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000037Larval:Day 5
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • UBERON:0000106zygote stage
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
  • ZFS:0000049segmentation
1.62e3
  • 1.62e3
  • 2.08e3
  • 2.32e3
  • 2.50e3
  • 2.58e3
  • 2.64e3
  • 3.27e3
  • 4.67e3
  • 4.80e3
  • 5.81e3
  • 5.97e3
  • 7.19e3
  • 7.23e3
  • 7.73e3
  • 1.38e4
  • 1.47e4
  • 1.48e4
  • 1.49e4
94.57
  • 94.57
  • 93.05
  • 92.24
  • 91.63
  • 91.37
  • 91.16
  • 89.04
  • 84.37
  • 83.92
  • 80.55
  • 80.02
  • 75.94
  • 75.80
  • 74.12
  • 53.74
  • 50.90
  • 50.61
  • 49.95
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
1.78e3
  • 1.78e3
  • 1.92e3
  • 2.41e3
  • 2.51e3
  • 3.41e3
  • 5.10e3
94.05
  • 94.05
  • 93.58
  • 91.95
  • 91.61
  • 88.60
  • 82.91
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
2.03e3
  • 2.03e3
  • 3.63e3
93.22
  • 93.22
  • 87.84
AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
2.87e3
  • 2.87e3
90.40
  • 90.40
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
3.34e3
  • 3.34e3
88.82
  • 88.82
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
3.76e3
  • 3.76e3
  • 5.24e3
  • 5.32e3
  • 5.64e3
  • 7.05e3
87.43
  • 87.43
  • 82.45
  • 82.18
  • 81.11
  • 76.41
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
4.78e3
  • 4.78e3
84.00
  • 84.00
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
5.12e3
  • 5.12e3
  • 6.10e3
  • 7.56e3
82.86
  • 82.86
  • 79.57
  • 74.70
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
5.33e3
  • 5.33e3
82.16
  • 82.16
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
6.39e3
  • 6.39e3
78.61
  • 78.61
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
7.43e3
  • 7.43e3
75.12
  • 75.12
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
7.48e3
  • 7.48e3
74.96
  • 74.96
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
7.48e3
  • 7.48e3
74.96
  • 74.96
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
7.68e3
  • 7.68e3
74.29
  • 74.29
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
7.80e3
  • 7.80e3
73.89
  • 73.89
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
8.50e3
  • 8.50e3
71.54
  • 71.54
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
8.98e3
  • 8.98e3
69.93
  • 69.93
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
9.17e3
  • 9.17e3
  • 9.99e3
69.31
  • 69.31
  • 66.54
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
9.24e3
  • 9.24e3
69.08
  • 69.08
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
9.28e3
  • 9.28e3
68.92
  • 68.92
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.00e4
  • 1.00e4
66.42
  • 66.42
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
63.35
  • 63.35
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.25
  • 60.25
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
1.34e4
  • 1.34e4
55.16
  • 55.16
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLCR628365, CR848671
EnsemblENSDARG00000044874 (zgc:92107)
Uniprot/SPTREMBLA5WUS3, A5WUS3_DANRE
ZFINZDB-GENE-041114-4 (zgc:92107)

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