D. rerio Gene: fmoda - ENSDARG00000044895 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000044895
Namefmoda
Descriptionfibromodulin a [Source:ZFIN;Acc:ZDB-GENE-041008-23]
OrganismDanio rerio (zebrafish)
Synonym(s)im:6910494, zgc:113456

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
836
  • 836
  • 1.06e3
97.20
  • 97.20
  • 96.45
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
1.57e3
  • 1.57e3
  • 1.68e3
  • 1.69e3
  • 2.21e3
  • 2.80e3
94.75
  • 94.75
  • 94.38
  • 94.34
  • 92.62
  • 90.63
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
2.93e3
  • 2.93e3
90.21
  • 90.21
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
3.15e3
  • 3.15e3
  • 1.22e4
89.45
  • 89.45
  • 59.12
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
5.68e3
  • 5.68e3
  • 2.03e4
81.00
  • 81.00
  • 31.87
AEIR
  • AEIR
  • AEIR
UBERON:0001003skin epidermis
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
6.15e3
  • 6.15e3
  • 6.54e3
  • 7.03e3
  • 7.91e3
  • 8.22e3
  • 8.22e3
  • 8.54e3
  • 1.07e4
79.40
  • 79.40
  • 78.12
  • 76.46
  • 73.52
  • 72.48
  • 72.48
  • 71.41
  • 64.28
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0010170region of neural crest
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
9.96e3
  • 9.96e3
  • 1.05e4
  • 1.09e4
66.66
  • 66.66
  • 64.99
  • 63.63
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
9.96e3
  • 9.96e3
  • 1.21e4
  • 1.37e4
66.65
  • 66.65
  • 59.61
  • 54.25
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001894diencephalon
  • ZFS:0000026Segmentation:14-19 somites
9.96e3
  • 9.96e3
66.65
  • 66.65
AEIR
  • AEIR
UBERON:0003055periderm
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
1.14e4
  • 1.14e4
  • 1.16e4
  • 1.20e4
  • 1.20e4
61.75
  • 61.75
  • 61.09
  • 59.98
  • 59.98
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.30e4
  • 1.30e4
56.41
  • 56.41
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
1.66e4
  • 1.66e4
44.32
  • 44.32
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.75e4
  • 1.75e4
41.55
  • 41.55
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.83e4
  • 1.83e4
38.69
  • 38.69
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.11e4
  • 2.11e4
29.18
  • 29.18
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EMBLCU459075
EnsemblENSDARG00000044895 (fmoda)
Uniprot/SPTREMBLF1QG51, F1QG51_DANRE
ZFINZDB-GENE-041008-23 (fmoda)

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